Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0504 ATGAGAGATTCTGAAATTCTTGTTTACAGGGAGCTCTATAGGAATGACTTAAGAGGAAAGATTCCTCGGGAACTTGGTAACTTGAAATCACTTATTAGCATGGATTTGTATGATAACAAGTTGGAGGGGAAGATTCCAAAGTCATTTGGAAAGTTGAAGTCACTTAAATTCCTGCGGCTAAACAACAACAACTTGACAGGATCAATCCCAAGAGAACTCACTCGTCTCACTGATCTCAAAATCTTTGATGTTTCTAATAATGATCTTTGTGGAACAATACCAGTAGAGGGCAACTTTGAATCTTTCCCAATGGAAAGTTTTGAAAACAACAGGTTTAGTGGCCCCGAGCTGAAAGGTCTTGTTCCATACGATTTTGGATGCTGA 384 0.388 MRDSEILVYRELYRNDLRGKIPRELGNLKSLISMDLYDNKLEGKIPKSFGKLKSLKFLRLNNNNLTGSIPRELTRLTDLKIFDVSNNDLCGTIPVEGNFESFPMESFENNRFSGPELKGLVPYDFGC 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0504 127 Pfam Leucine rich repeat 34 89 IPR001611 GO:0005515
Ssu7g0504 127 Gene3D Ribonuclease Inhibitor 2 118 IPR032675 -
Ssu7g0504 127 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 11 115 - -
Ssu7g0504 127 SUPERFAMILY L domain-like 12 116 - -
Ssu7g0504 127 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN-RELATED 11 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0504 Ssu-Chr7 9387889 9389001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0504 7 114 Receptor kinase-like Gene Family AT1G71830 35.780 3.74e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0504 - - gmx:100816279 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0504 7 9387889 9389001 Ssu7g0504 7 9387889 9389001 ECH
Ssu2g3167 2 93929321 93931378 Ssu7g0504 7 9387889 9389001 PCT