Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g3167 ATGTCTAGTTTGGTTTTCCTGTCTGTGTTATTTCTCCTTTTCCAATGTCCTCTCTCTTCCCTCTCAAACTCTGAAGGAGACGCTCTGTATGCTTTCAAAGGAAGGCTTTCTGACCCCAACAACGTACTGGAGAGCTGGGACCCAAGTCTCGTTGATCCTTGTACTTGGTTTCATGTGACCTGCGACCCCAGCAATAACGTCATTCGCTTAGACTTGGGCCAATATGACCTCTCTGGAACCTTGGCCCAAGAACTTGGCCAGCTGCCCTACCTCCAGTATCTGGAGCTCTTTGGGAATAAATTAAGTGGGCAGATTCCTGAGGAACTTGGTAACTTGAAGAACCTTATTAGTATGGATTTGTATGATAACCAATTGGAAGGGAATATCCCAACGTCATTTGGCAACTTGAAGTCACTTAAATTCCTACGCCTAAACAACAACAAGCTGACAGGAATAATCCCAAAAGAGGTCACTCGTCTTAATCTCCAAGTCTTTAATGTTTCTAATAATCACCTCTCAAAACCACCAGTATATGGCAACTTCGAATCATTCCCGATGAAAAGTTTTGAGAATAACAAGCGGCCCAGAGCTGAAACGACTGGTTCCTCATGA 612 0.4395 MSSLVFLSVLFLLFQCPLSSLSNSEGDALYAFKGRLSDPNNVLESWDPSLVDPCTWFHVTCDPSNNVIRLDLGQYDLSGTLAQELGQLPYLQYLELFGNKLSGQIPEELGNLKNLISMDLYDNQLEGNIPTSFGNLKSLKFLRLNNNKLTGIIPKEVTRLNLQVFNVSNNHLSKPPVYGNFESFPMKSFENNKRPRAETTGSS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g3167 203 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 2-LIKE 4 191 - -
Ssu2g3167 203 Pfam Leucine rich repeat 114 172 IPR001611 GO:0005515
Ssu2g3167 203 SUPERFAMILY L domain-like 22 182 - -
Ssu2g3167 203 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Ssu2g3167 203 Gene3D Ribonuclease Inhibitor 21 201 IPR032675 -
Ssu2g3167 203 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 4 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g3167 Ssu-Chr2 93929321 93931378 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g3167 22 192 Receptor kinase-like Gene Family AT1G34210 58.382 3.03e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g3167 - - gmx:100777352 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g3167 2 93929321 93931378 Ssu7g0504 7 9387889 9389001 PCT