Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0479 ATGAGTTGCATTGCAAAGATGCCAACAGCTATCAGGCACAGCTATCAGCTTCCCCTACTCCACCGACTTCTTTACTTTGCTGTCTTTTTCTCATTATCCTGCGCAATGGAAGATGGAGAATGGGTAATGGTGCGGAGCCCCCCACAGAAGGACCGGTGGAAACCAAGTTTAACAAATGCAGAGGATGAGGCTCCGAGGCCCTTGAAGATTACCTTTTCTGGGCCTGCAACCCACTGGACCGATGCCATCCCCATCGGCAATGGCCGTCTCGGGGCCATGGTTTGGGGTGGCGTTCCATCAGAAGCTCTCCAGCTCAATGAGGACACGCTTTGGACTGGGATTCCTGGAGACTACACCAACAAAAGTGCTCCACAAGCACTGGCTGAAGTCAGAAAGCTTGTTGATGATAGAAAATTCTCTGAAGCTACGGCAGCAGCTGTCAAGTTGTCAGGAGATCCTTCTGATGTATACCAACTTCTCGGCGATATCAAGTTAGAATTTGATGATTCTCATCTTACATATTCAAAAGAGTCATATTACAGGGAGCTAGATTTGGATACCGCAacggtaaaaataaaatactctgTGGGTGATGTAGAATTTTCCAGAGAACATTTTGCTTCTAATCCAGACCAAGTGATAGTGACAAGGATTTCTGCAAGCAAGCCTGGGTCATTATCATTTACAGTGTATTTCGATAGCAAAATGCATCACGATTCGAGGGTAAGTGGCCAAAATCAGATAATCATGGAAGGAAGCTGTCCTCACAGTAGGATCCGACCAAGAGTGAATTCAATTGACAATCCAAAGGGAATTCAGTTTTCTGCAGTTCTTGATATACAGATTAGTAAAGATAAAGGGGTTATCCATGTTTTGGATGATAAGAAGCTAAGAGTTGAAGGTTCAGATTGGGCTATTTTGCTTTTGACAGCTTCTTCTTCCTTTGATGGCCCATTTACTAAGCCTGAAGACTCTAAGAAGGATCCTACTTCTGAGTCCCTCAGTAAAATGAAATCTGTGAAAAAAATTTCGTATGCTGATCTTTATGCACGTCACTTGGATGACTATCAAAATCTATTTCATCGTGTCTCATTGCGACTCTCTAAAAGCTCCAAGACTCTTTTAGGAAAATCTGTTTTGGACAAAAGGAAATTGGTTTCCTCCCAAACTAACATCTCTCAAAAGGGAGGGCATGACACCGTTCCAACTTCAGCAAGAGTCAAATCTTTTCAAACTGATGAAGATCCTTCCTTTGTGGAGCTTTTGTTTCAATATGGTCGATATCTGCTAATCTCTTGTTCGCGTCCTGGAACTCAGGTGGCAAACCTACAGGGTATCTGGAATAAAGATGTTGAGCCTGCATGGGATGGTGCTCCTCACTTGAACGTTAATCTTCAAATGAATTATTGGCCATCCCTTTCTTGCAACCTGCATGAGTGTCAAGAGCCCTTATTTGATTTCATTTCCTCTTTGTCAGTCAATGGTAATAAAACTGCAAAGGTGAACTATGAAGCAAATGGTTGGGTTGCACATCAAGTTTCTGACATATGGGCTAAAACATCACCAGATCGAGGTGAGGCTGTTTGGACTTTATGGCCAATGGGTGGAGCTTGGCTTTGTACCCATTTATGGGAGCATTATACTTATACAATGGACAAAgattttcttaaaaataaagcatatcCTTTGTTGGAAGGATGTACGTCATTTTTGTTGGATTGGTTGATTGAAGGCCGTGGAGGATTATTGGAAACTAACCCGTCAACTTCACCAGAGCACATGTTCACTGCGCCAGATGGAAAGCCTGCTAGTGTGAGCTACTCATCAACCATGGACATTTCAATCATAAAAGAAGTTTTCTCTATAATTATTTCTGCTGCTGAGGTTTTGGGAAGACATGATGATGCTATTATCAAAAGAGTCACCGAGTCTCAGTCTAAGCTTCCTCCGACCAAAGTTGCTAGAGATGGTTCCATTATGGAATGGGCAGAAGATTTTCAGGACCCAGATGTACATCATCGTCATGTTTCGCATCTGTTTGGACTGTTTCCAGGGCATACAATTAGTGTCGAGAAAACTCCAGACCTCTGTAAAGCTGTGGAATTTAGTCTAATTAAAAGAGGTCTTTTATGA 2133 0.4191 MSCIAKMPTAIRHSYQLPLLHRLLYFAVFFSLSCAMEDGEWVMVRSPPQKDRWKPSLTNAEDEAPRPLKITFSGPATHWTDAIPIGNGRLGAMVWGGVPSEALQLNEDTLWTGIPGDYTNKSAPQALAEVRKLVDDRKFSEATAAAVKLSGDPSDVYQLLGDIKLEFDDSHLTYSKESYYRELDLDTATVKIKYSVGDVEFSREHFASNPDQVIVTRISASKPGSLSFTVYFDSKMHHDSRVSGQNQIIMEGSCPHSRIRPRVNSIDNPKGIQFSAVLDIQISKDKGVIHVLDDKKLRVEGSDWAILLLTASSSFDGPFTKPEDSKKDPTSESLSKMKSVKKISYADLYARHLDDYQNLFHRVSLRLSKSSKTLLGKSVLDKRKLVSSQTNISQKGGHDTVPTSARVKSFQTDEDPSFVELLFQYGRYLLISCSRPGTQVANLQGIWNKDVEPAWDGAPHLNVNLQMNYWPSLSCNLHECQEPLFDFISSLSVNGNKTAKVNYEANGWVAHQVSDIWAKTSPDRGEAVWTLWPMGGAWLCTHLWEHYTYTMDKDFLKNKAYPLLEGCTSFLLDWLIEGRGGLLETNPSTSPEHMFTAPDGKPASVSYSSTMDISIIKEVFSIIISAAEVLGRHDDAIIKRVTESQSKLPPTKVARDGSIMEWAEDFQDPDVHHRHVSHLFGLFPGHTISVEKTPDLCKAVEFSLIKRGLL 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0479 710 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Ssu7g0479 710 SUPERFAMILY Six-hairpin glycosidases 327 696 IPR008928 GO:0005975
Ssu7g0479 710 PIRSF UCP007663 42 710 IPR016518 GO:0004560
Ssu7g0479 710 Pfam Glycosyl hydrolase family 65, N-terminal domain 71 317 IPR027414 -
Ssu7g0479 710 Gene3D - 495 667 IPR012341 GO:0005975
Ssu7g0479 710 PANTHER - 36 708 - -
Ssu7g0479 710 PANTHER ALPHA-L-FUCOSIDASE 2 36 708 - -
Ssu7g0479 710 Gene3D putative glycoside hydrolase family protein from bacillus halodurans 69 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0479 Ssu-Chr7 8984381 8988816 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0479 K15923 - gmx:100810387 1265.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0479 7 8984381 8988816 Ssu7g0479 7 8984381 8988816 ECH
Ssu2g3172 2 94016034 94025312 Ssu7g0479 7 8984381 8988816 PCT