Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g3172 ATGGAAGCGGAAGCGCGGAGGAGTTCGAATTTGAAGATTAGGTTTAGAGAAGGTGGGAAGCACTGGACCGATGCACTTCCCATTGGGAACGGACGCCTCGGAGCCATGGTCCGCGGCCACCTCCAATCCGAAACCATCCACCTCAATCAGGACACGCTCTGGACTGGCACACCCTCAGATTACACTAATTCTAAAGCTCCACAAGCACTTTCTCAGGTTAGAAACCTCGTTAACCGTCAACAATATCCACAAGCCACTGCTGCTGCTGCTGGCTTAACAGGAAATCCATCCGAGGCCTACCAACTTCTTGGCGATATCAAATTGGACTTTGATTATTCACATCTCACGCGCGGCCAAGAAACTTATGAGAGGGAGCTGGACTTGAACACTGCTACTGTCAAAGTCAGATATTCCGTCGGAGATGTTGAGTTCAAAAGGGAGCACTTTGCCTCCTATCCAGATCAAGTCATTGTCAATAACATTTCGGCCAGTAAACCCGCCAAACTTTCATTTACAGTTTCTCTACACAGCAAAATGGTTAATCAAACTTATGTAAATGGCACTAATCAGATTATAATGAAGGGAGCATGTCCTGGTAAAAGGATCCCATCCCAACTCCAACACAAGGCACAAGATAATCCACAGGGAATTCAATTCTCGGCAATTCTTGATTTGAAGATTGGTGGTAGAAATGGTGTCATCAATATTTTGGACGACAACAAATTGAAGGTCGAGGCTTCAGATTGGGCTGTTTTACTTCTTGTTGGTTGGTCTTCCTTCAGTGGCCCATTTACTGCACCTTCAGATTCTAAAAAGGATCCCACTTCAGACTGTTTCAGTACATTGAGCTCAATAAGCAATGTATCATATTCTGATCTTTATGCACGCCATTTAAATGACTATCAAGATCTTTTTCACCGAGTTTCGCTGCAGCTTATGAGAAGCACCCAGCAGAATATATCGGAAGACAGGTCCTTGGAATTGAAGAAGAGGCTTGCCCCATCTGTAGCCCATTTGTCTCTTCTGGATAGTGTAACACAAGTTTCAACTTCAGACAGGGTGAAATCATTTCAGACTGATGAAGATCCATCCTTGGTGGAGCTTCTATTTCAATATGGTCGTTATTTGCTTATTTCTTGTTCACGCCCTGGAACTCAGGTGGCAAACCTACAGGGGATTTGGAACAAGGATCTTGAGCCAGCTTGGGATGGAGCTCCCCACTTGAACATCAATCTTGAAATGAACTATTGGCCTGCTCTTCCTTGCAATCTTAGCGAGTGTCAAGAACccttgtttaattatatttcctCTCTTTCTGTGAATGGCAGTAAAACTGCATATGTGAATTACCAAGCAAGTGGTTGGGTGGCACATAGTAAATCAGATATATGGGCGAGAACTTCAGCAGGTCAAGGTGATGTTGTGTGGGCCTTGTGGCCAATGGGTGGAGCATGGCTTTGTACCCATCTCTGGGAGCACTATGCTTACACAATGGATGAGGATTTCCTCAAATATAAAGCATATCCCTTAATGGAAGGATGCGTGTCATTTCTGTTGAGCTGGCTGATTGAAGACGGTGAAGGATATCTTGAAACTAATCCATCAACTTCCCCTGAACATTATTTTATTGCTGCCAATGGTGAGCCTGCTTGTGTAAGCCAGTCATCCACAATGGATGTGGCTATCATAAACGAAGTCTTCTCCATATTTCTTTCTGCTGCTGAGGTTCTAGGGAGAACAAAGGATAATATCATTGGAGAAGTTCGTAGAGCTCAACCACAGTTACGTCCAATCAATATTGCGCAGGATGGTTCCATTATGGAATGGCTGAAAGATTTCAAGGATCCAGAGGTGCATCACCGGCACCTTTCACATCTATTCGGTCTATTTCCAGGGCATACAATTACTTTTAAGGAAACTCCAGCCCTGTTTGAAGCTGCTGAGAAAAGCCTTTGTAAACGAGGAGAGGAAGGTCCTGGATGGTCAACCACATGGAAAACTGCTTGCTGGGCACGTCTACAGAACAGTTCTAATGCATATAAGATGATCAAGCGCTTGATCAACTTGGTGGATCCGGATCATGAGAGACCATTTCAAGGTGGACTTTACAGCAACCTTTTTGCTGCACACCCACCATTTCAGATTGATGCCAACTTCGGTTTTGCAGCGGCAGTTGCAGAAATGCTTGTTCAGAGTACTTTGAGTGATATTTTCTTCCTTCCTGCCCTTCCCCGGGAGAAATGGCCAAATGGCTCCGTGAAAGGCTTGAAGGCTCGTGGAGGAACCACAGTTAGCATATGCTGGAGAGAAGGGGATCTTCAGGAGGTTGGTATATGGTCCGAGGACCAAACAAGAACaactataagaaaaagaatacacTATAGAGGAACCATGGTCACCACAGACTTAGTGTCTGGCGTTTTTTACAAGTTCAACGAACATTTGAAGTGCTTGAACACATGCTCTCTTTCAGAAATGGCGTGTTCTTGA 2490 0.441 MEAEARRSSNLKIRFREGGKHWTDALPIGNGRLGAMVRGHLQSETIHLNQDTLWTGTPSDYTNSKAPQALSQVRNLVNRQQYPQATAAAAGLTGNPSEAYQLLGDIKLDFDYSHLTRGQETYERELDLNTATVKVRYSVGDVEFKREHFASYPDQVIVNNISASKPAKLSFTVSLHSKMVNQTYVNGTNQIIMKGACPGKRIPSQLQHKAQDNPQGIQFSAILDLKIGGRNGVINILDDNKLKVEASDWAVLLLVGWSSFSGPFTAPSDSKKDPTSDCFSTLSSISNVSYSDLYARHLNDYQDLFHRVSLQLMRSTQQNISEDRSLELKKRLAPSVAHLSLLDSVTQVSTSDRVKSFQTDEDPSLVELLFQYGRYLLISCSRPGTQVANLQGIWNKDLEPAWDGAPHLNINLEMNYWPALPCNLSECQEPLFNYISSLSVNGSKTAYVNYQASGWVAHSKSDIWARTSAGQGDVVWALWPMGGAWLCTHLWEHYAYTMDEDFLKYKAYPLMEGCVSFLLSWLIEDGEGYLETNPSTSPEHYFIAANGEPACVSQSSTMDVAIINEVFSIFLSAAEVLGRTKDNIIGEVRRAQPQLRPINIAQDGSIMEWLKDFKDPEVHHRHLSHLFGLFPGHTITFKETPALFEAAEKSLCKRGEEGPGWSTTWKTACWARLQNSSNAYKMIKRLINLVDPDHERPFQGGLYSNLFAAHPPFQIDANFGFAAAVAEMLVQSTLSDIFFLPALPREKWPNGSVKGLKARGGTTVSICWREGDLQEVGIWSEDQTRTTIRKRIHYRGTMVTTDLVSGVFYKFNEHLKCLNTCSLSEMACS 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g3172 829 PANTHER ALPHA-L-FUCOSIDASE 2 6 826 - -
Ssu2g3172 829 SUPERFAMILY Six-hairpin glycosidases 272 780 IPR008928 GO:0005975
Ssu2g3172 829 Gene3D - 256 729 IPR012341 GO:0005975
Ssu2g3172 829 PANTHER - 6 826 - -
Ssu2g3172 829 PIRSF UCP007663 1 816 IPR016518 GO:0004560
Ssu2g3172 829 Pfam Glycosyl hydrolase family 65, N-terminal domain 15 259 IPR027414 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g3172 Ssu-Chr2 94016034 94025312 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g3172 K15923 - gmx:100777878 1494.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g3172 2 94016034 94025312 Ssu7g0479 7 8984381 8988816 PCT