Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3619 ATGGCTGTTGAAAACTCTCTCCAAATAACTAGAAGTGGTACTGGCGGTTATGATGATGATGGGCGTGCCAAGAGGACCGGAACTTTATGGAGTGCTGTGGCTCATATCATCACAGCTATTATTGGTGCTGGTGTTCTGTCTCTGGCATGGAGTACTTCCCAATTAGGATGGATTGCAGGACCAGTTGTATTGATTTTTTGTGCAATTGTCACCTGCATTTCTTCATTCATCCTTTCCGATTGTTACAGAACTCATGATCCTGTAACTGGGAAAAGAAACTACTCTTACATGGATGCCGTTAGAATCTATCTTGGCCATAAAAGGACATGGTTGGCTGGTTTGCTTCAATATTTGAGCTTGTATGGGGTTAGTACTGCTTATGTAATTACCACAGCAACCTGTTTGAGAGCGATACTGAAATCAAATTGCTATCACAAGGAAGGGCATCAAGCTCCTTGTAGCTATGGGGATACAGTATATATGATGCTGTTTGGATTAGTTCAGATCTTTATGTCATTCATACCAAATCTCCACAACATGGCATGGGTTTCAATTGTTGCGGCCATAATGTCCTTTACATACGCATCTATTGGACTTGGACTAGGCATCACAACAGTAGTAGAAAATGGAAGAATTATGGGGAGTTTAACAGGAGTACCGGCTTCAAATATTGCCAACAAGTTATGGTTAGTCTTCCAAGCACTTGGTGATATTGCCTTTGCCTATCCATACACGGTCATCCTCCTTGAGATACAGGACACTCTAGAGTCTCCTCCACCAGAAAACAAGACCATGAAAAAGGCCTCCATGATTGCTATCCTCATTACAACATTCTTCTACCTCTGCTGTGGATGCTTCGGATATGCAGCTTTTGGAAATCAAACACCAGGGAACCTCTTGACAGGGTTTGGGTTTTACGAGCCTTACTGGCTCGTTGACTTTGCTAATGCTTGCATTGTTCTTCACTTAGTAGGAGGATATCAGATTTACTGTCAGCCGATATATGGTGCTGTTGACAGATGGTGTTCAAAAAAATTCCCCAACAGTGGCTTTGTGAATAACTTCTACCAATTGAAACTGCCTCGGTTGCCAGCTTTTCAGCTAAACATGTTCAGGATATGTTTTCGAACAGCCTATGTGGTTTCCACTACTGGACTTGCCATCCTGTTTCCTTACTTCAATCAAGTTCTAGGTGTGTTAGGAGCCTTAGGCTTTTGGCCATTGGGTATATATTTCCCGGTAGAGATGTACTTTGTGCAGAGGAAAATTGAAGCTTGGTCTAGCAAATGGATTGTCCTTAGGACCTTCAGCATTATTTGCTTTCTTGTGTCAGTACTGGGTCTCATTGGATCACTTGAAGGAATCATCAGCGAGAAACTTAGTTAA 1386 0.4221 MAVENSLQITRSGTGGYDDDGRAKRTGTLWSAVAHIITAIIGAGVLSLAWSTSQLGWIAGPVVLIFCAIVTCISSFILSDCYRTHDPVTGKRNYSYMDAVRIYLGHKRTWLAGLLQYLSLYGVSTAYVITTATCLRAILKSNCYHKEGHQAPCSYGDTVYMMLFGLVQIFMSFIPNLHNMAWVSIVAAIMSFTYASIGLGLGITTVVENGRIMGSLTGVPASNIANKLWLVFQALGDIAFAYPYTVILLEIQDTLESPPPENKTMKKASMIAILITTFFYLCCGCFGYAAFGNQTPGNLLTGFGFYEPYWLVDFANACIVLHLVGGYQIYCQPIYGAVDRWCSKKFPNSGFVNNFYQLKLPRLPAFQLNMFRICFRTAYVVSTTGLAILFPYFNQVLGVLGALGFWPLGIYFPVEMYFVQRKIEAWSSKWIVLRTFSIICFLVSVLGLIGSLEGIISEKLS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3619 461 PANTHER OS05G0424000 PROTEIN-RELATED 4 460 - -
Ssu6g3619 461 Pfam Transmembrane amino acid transporter protein 25 456 IPR013057 -
Ssu6g3619 461 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 4 460 - -
Ssu6g3619 461 Gene3D Amino acid/polyamine transporter I 22 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3619 Ssu-Chr6 79912919 79916288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3619 17 456 Organic Solute Cotransporters AT5G09220 53.047 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3619 K24917 - gmx:100786621 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3619 6 79912919 79916288 Ssu6g3619 6 79912919 79916288 ECH
Ssu9g1138 9 43244677 43247676 Ssu6g3619 6 79912919 79916288 PCT