Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3483 ATGGAGGAGCCAACTTTTGTGTCGAAAGCGAGGACCGCCTTCCATTCCGCGGCTGCGAAAGCGGAGCGCGTTCTCTTGGATTTCAAATCCGATCGAGAAGATCACGATAAGCAATCGCCCAACAGCTTCACCAGGCAACCGGAAGCTGAATCTCCGAACAACGAAAACGAGTCCAAGCTTCGCAGTGAATTGAAGCATATAAAGTGGAGGCCTCCACATATAGGAATAAAGCAGGATTGGCAAGATAGAATAAAGACCATTCGCAGAGGGAGAAAAGAAGTTGAAGATACAGATAAAGTTGGGGATGCAAACATGGCAATTCCATTTTATGATGATAATTTGTACATCCTGAATGTGAAGAATGATCTTGAGGCCAAGGCTTCAGAAGCAATTCCCTCAGTTGAGGGCCTAACTGCTGCGACTAAAGATCCCATTCCTCCATCATCTGTACTGAAGCAATTAGCTATAGCTGTTGAGGCTGGAAGTAAAGCGAAGTCAATGAAAGGTTTTATAGCTTCATCAGGAGGTTCTTCGCCTGCTAAAGAGAGGGCAGGATTAAGTCTCTCTGCAGTTAAGGCTTTAGTGCTACGTGAAAAGGAAGACAAACTTACCTCTGAGTTTATTAGCAATGAGAAAGTTGTGCAGTTAATTAATTCTCTGTTTGATCCAGAGGGAGATTTCCTTAGAAGAAAGATCAACTCTAATATAGAGGAAACTGCCATGACATCTTTGCCAAGAGATATTCATGGTGCTCCTCCTGAAAGCCTTGCTGTTAAGCTAGCTGAAATCTTTGGAAACTACAAGTCTCTCCGAAAAATGGCTCTTTTCTGGTTCAGGGTTGTTGCTGAACTAAGAAAACTTTGGTCTGAGGAACAACATTTACCGGGAGTCCCCCAGAATGAGATTCCTGATCTGAAGTCATGTCTTCTGTATCAACAATTTCAAGTAATTAATTGCTGCATCTCTCGGAAAAGGCTCTGTATTATTGCCACTGAATCTCTAGACTCTATGATGATGCAAGCTAATTCAGACATAAAAGAATCAACTGATTATAATGCTGGAGCTCCTGCATGCCCTGTTCTATATGCTAGATTAAATAGTGGGGAGCTTGTTCTTCGACTTGGTGCAGATTGCCCTGCTGGAGATATGACATTGTTGGAAACTGGCGAGCCTGTGTACTCTCCAGTCACCCagGAAGGACCTTTGCTTACAGAAGATCTAATCAGGGAAACAGAGGAGTTTGTGCTGCGGACAGGGAGTGTTGGTGCTGGGTGCTCTCAACTGCTCTCAGATATGCAGGCTTTCAAGGCTGCAAATCCTGGATGTATTTTGGAGGATTTCGTAAGATGGCACTCTCCTCCTGATTGGACAGATAATGAGGCAAGTACTGAGGATAGTGATGTTTTTGATAGTGGTGAGTCATTGTCTGCAAGAGGTCAGCTAAGTCGACGAATGCAAAAAGAAGGTAATTTATGGCGTGAATTGTGGGAAACATCTAAACCAGTGCCTGCTGTTAAGCAGGCACCTCTATTTGATGAGGATTTGGCAGTGGAGGGCATCCTCAATGCATTTGAGAACATCCATCCTTCTGATCTTTTTGGACAGCTGTTTGTTTCTTTAGTaagttctttattttatttttatcacattgaTTACTTTTGTTATGTATAG 1671 0.4261 MEEPTFVSKARTAFHSAAAKAERVLLDFKSDREDHDKQSPNSFTRQPEAESPNNENESKLRSELKHIKWRPPHIGIKQDWQDRIKTIRRGRKEVEDTDKVGDANMAIPFYDDNLYILNVKNDLEAKASEAIPSVEGLTAATKDPIPPSSVLKQLAIAVEAGSKAKSMKGFIASSGGSSPAKERAGLSLSAVKALVLREKEDKLTSEFISNEKVVQLINSLFDPEGDFLRRKINSNIEETAMTSLPRDIHGAPPESLAVKLAEIFGNYKSLRKMALFWFRVVAELRKLWSEEQHLPGVPQNEIPDLKSCLLYQQFQVINCCISRKRLCIIATESLDSMMMQANSDIKESTDYNAGAPACPVLYARLNSGELVLRLGADCPAGDMTLLETGEPVYSPVTQEGPLLTEDLIRETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTDNEASTEDSDVFDSGESLSARGQLSRRMQKEGNLWRELWETSKPVPAVKQAPLFDEDLAVEGILNAFENIHPSDLFGQLFVSLVSSLFYFYHIDYFCYV 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3483 556 MobiDBLite consensus disorder prediction 26 41 - -
Ssu6g3483 556 MobiDBLite consensus disorder prediction 26 63 - -
Ssu6g3483 556 Pfam Rab3 GTPase-activating protein catalytic subunit 373 525 IPR026147 -
Ssu6g3483 556 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 5 543 IPR045700 GO:0005096|GO:0043547
Ssu6g3483 556 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 5 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3483 Ssu-Chr6 77719255 77725185 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3483 K18270 - gmx:100818643 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3483 6 77719255 77725185 Ssu6g3483 6 77719255 77725185 ECH
Ssu9g0963 9 39503624 39512600 Ssu6g3483 6 77719255 77725185 PCT