Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2469 ATGAGCATGAAGAGAGTCCTCCTATTGGTAAACTCCATCCTTCTAGCCATAGGCACCTCCGGTGGGGCCCTCGCCATGCGTCTCTACTTCATCCACGGTGGCAACCGAATCTGGCTCTCTAGCTTCCTCGAAACCGCTGCCTTCCCCGTCATTCTCGTTCCCTTATCCATCTCTCACATCCATCACTACTGTCATCCTCATCATCGTCACCTCGCAAAACCAAACCTCTTCTCTATGAAGCCACCACTCTTCCTCGCCTCCGCCGTCGTCGGAATCCTCACCGGCCTCGACGACTACCTGTACGCCTGCGGCGTTGCGCGGCTCCCTGTCTCCACTTTCTCCCTAATTCAAGCCTCCCACCTCGCCTTCACCGCCCTCTTCGCGTTCCTCCTCGTCAGGCACCGGTTCACGGCGTACTCGGTGAATGCCGTCGTGCTGCTGACCGTCGCTGCGGTGGTTCTGGCGCTGCATTCCGGCGGGGACCGTCCCGCCGGCGAGTCCACTCGACAGTACGTGATTGGTTTTGTTATGATACTGGCGGCTGCGGCGCTGTATGGGTTCGTTTTGCCGTTGATGGAGTTGGTGTACAGAAAGAGCAAGCAACGTATCACGTACTCTCTCGTCATGGAGATTCAGCTTGTCATGTGCTTCTTTGCTACCTTGTTCTGCACCGCTGGAATGATGATAAACAATGACTTCAAGGTGATTTCGCGAGAAGCAAGAGAGTATAAACTTGGGGAAACAAAGTATTATGTTGTGCTAGTGTGGAGTGCTATAATGTGGCAGTTTTTCTTCTTGGGAGCAATAGGGGTTATCTTTTGCGCCTCGTCTTTGCTGTCTGGTATTATAATTGCTGCTTTTCTTCCAGTGACGGAAGTTTTGGCTGTTATTGTATACAAAGAGAATTTTCAAGCAGAGAAAGGGGTTGCTTTGGTGCTCTCTCTATGGGGTTTTGTGTCCTACTTCTATGGTGAGATTAAACAAGATAGAGAAAAGAACAAGAATCTTTGCCCAGAAACAGAGCTACCTCAAAGTCTTCCTCCCAATACATGA 1053 0.51 MSMKRVLLLVNSILLAIGTSGGALAMRLYFIHGGNRIWLSSFLETAAFPVILVPLSISHIHHYCHPHHRHLAKPNLFSMKPPLFLASAVVGILTGLDDYLYACGVARLPVSTFSLIQASHLAFTALFAFLLVRHRFTAYSVNAVVLLTVAAVVLALHSGGDRPAGESTRQYVIGFVMILAAAALYGFVLPLMELVYRKSKQRITYSLVMEIQLVMCFFATLFCTAGMMINNDFKVISREAREYKLGETKYYVVLVWSAIMWQFFFLGAIGVIFCASSLLSGIIIAAFLPVTEVLAVIVYKENFQAEKGVALVLSLWGFVSYFYGEIKQDREKNKNLCPETELPQSLPPNT 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2469 350 PANTHER PURINE PERMEASE 2 347 - -
Ssu6g2469 350 PANTHER OS09G0467300 PROTEIN-RELATED 2 347 IPR030182 GO:0015211|GO:0016021
Ssu6g2469 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 79 159 - -
Ssu6g2469 350 Pfam Purine nucleobase transmembrane transport 7 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2469 Ssu-Chr6 58148543 58150597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2469 3 343 Organic Solute Cotransporters AT1G28230 58.501 2.58e-138 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2469 - - ccaj:109789210 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2469 6 58148543 58150597 Ssu6g2469 6 58148543 58150597 ECH
Ssu6g2469 6 58148543 58150597 Ssu1g3139 1 82204566 82229064 PCT