Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2459 ATGAACGCGCAAGCGGTGAAGAGGTTCGTTGAGGAGAATCAGAAGTTGGCGGCGGCGTGTGAGAATCTCGTGGAGCAGTGCGTGAAATTGGAAAGGGAATGCTCGCTGTACGACCACGACAGGGAAGCGTTGATGGAGTTTGGGAACGAGGCTGATGAACGCGCGCAGCAGGCTCACGCGCGTGCCCTCGAGTTGGAACAAGATTTAGTCTTGTTGGAGCAAGAATTGATCAAATACAAGCAGGAGCACGAATCGGTTGATTCTTCTTCTGCAAGTACACTTGACGAAGAGAATTTGCTTGAGTCCCTTTTGGCGACGGTTACGACTAAAGATGAGTCTTCTACATGTGCATTCTTAAATGCAAACAGTGAAAATGAGCTGGTGACAATGTGGAGCTGCTTGAAGCCATCAACGCGGAGAGTTTTGTGTCTTGTTGCTGAAGTCAAATCTctagaaaatgataaagaaaatcTAAGGGTTAACCTTCACAGAGCAGAAGAGGAGGTCAAATTATTGTTCGATGAAAATAGTGTGTTGGATGAGGAGAATAAAAGATTAGCGAAGCGATGCAAGGAAAGGATTTCTGGTGGGAAACCTACCGGCAGCACATCTGCGAAGTCATATAAGAGAAAGTCTAGTCCCAAGACATGTAGCCCAATGGCGAGGAAGATTGATTTTGAAGATATAGATTCAGCCAGAACACCGCTGTCACCTTTGGGAAATAAACTCTCCCCGACTGCCGCatgtataagaaataaaaggaacTAA 768 0.444 MNAQAVKRFVEENQKLAAACENLVEQCVKLERECSLYDHDREALMEFGNEADERAQQAHARALELEQDLVLLEQELIKYKQEHESVDSSSASTLDEENLLESLLATVTTKDESSTCAFLNANSENELVTMWSCLKPSTRRVLCLVAEVKSLENDKENLRVNLHRAEEEVKLLFDENSVLDEENKRLAKRCKERISGGKPTGSTSAKSYKRKSSPKTCSPMARKIDFEDIDSARTPLSPLGNKLSPTAACIRNKRN 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2459 255 PANTHER PLANT PROTEIN MATCH IS: (TAIR:PLANT.1) PROTEIN, PUTATIVE-RELATED 1 241 - -
Ssu6g2459 255 PANTHER EARLY ENDOSOME ANTIGEN 1 241 - -
Ssu6g2459 255 MobiDBLite consensus disorder prediction 197 214 - -
Ssu6g2459 255 Coils Coil 6 33 - -
Ssu6g2459 255 MobiDBLite consensus disorder prediction 192 218 - -
Ssu6g2459 255 Coils Coil 141 182 - -
Ssu6g2459 255 Coils Coil 55 82 - -
Ssu6g2459 255 MobiDBLite consensus disorder prediction 235 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2459 Ssu-Chr6 57868002 57870247 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2459 - - gmx:100801655 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2459 6 57868002 57870247 Ssu6g2459 6 57868002 57870247 ECH
Ssu6g2459 6 57868002 57870247 Ssu1g3129 1 81839474 81841835 PCT