Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3129 ATGGATCTCCCTCGAGACGTGGACGACTACGTTAAACAAACCCTCGACGATTCATTAGGGATTCCCGTGTCTTCGCAAACCCTAGAGGCCAAGCTTCGAGCCTCCCAAGACTCGCAGTGGCGCCTCCGCGAACGCCTCCTTTCCCTTCTCCCCCAGTTGAAGCAGAAAGACCAACTCATCGAGCGCTTCAAGTCTGAGGCGGGTATGAACGCGCGAGCGCTGAAGAAGTTCGTTGAGGAGAACCAGAAACTGGCGATGGAATGTGAGAAATTGTTGGGGTACTGCCAACAGTTGGAGAATGAGTGCGCGCTGTATGATAAGGACAGGGAAGCGTTGATGGAATTTGGGAACGACGCTGATGAACGGGCACGGGAGGCGCAATCCCGGGTTCTTGATTTGGAACGGGATTTGCTCTTCATGGAGAATGAATTGAACAAATATAAGCGCCAGCATGAATTGGTCAATTCTTCTTCTGCGTGCACACTTGGGGAAAAGAATTTACTTGATTCTGTTTGGGCAACACTGACTAGTAATGATGACAATTCTACATATGCATTTTTGCAAGTAAACAGTGAGAATGAGTCCTGTAAAAAGTTGCTGAGTATGTGGAACTGCATAAACCCAACAACTCGGAGTGTTTTGTCACTTGTTGCCAAAGTCAAGTCACTTGAGAAGGATAAGGAGCATCTAAGAACTAACCTTCACAAAGCTGAGGAGGAGGTCAAATTActgtttgatgaaaataatctaCTGGAAAAGGAGAACAAAAGGTTATTGAGGCAACACAAGGAAAGGAACCATCCTGATTCTGGGGGCAAACATACCAACAGCCCATCAGCCAAGTCAAACAAGAGGAAGTCTAGTCCCAGAACAAGTAGCCCAATGGAGAGGAAGATTGATTTTGACGTTCTAGATTCAGCAAGACAACCATTATCACCTTTACATAACTCCCCAGACTTTAGAATGCATAAGAAGTAA 978 0.455 MDLPRDVDDYVKQTLDDSLGIPVSSQTLEAKLRASQDSQWRLRERLLSLLPQLKQKDQLIERFKSEAGMNARALKKFVEENQKLAMECEKLLGYCQQLENECALYDKDREALMEFGNDADERAREAQSRVLDLERDLLFMENELNKYKRQHELVNSSSACTLGEKNLLDSVWATLTSNDDNSTYAFLQVNSENESCKKLLSMWNCINPTTRSVLSLVAKVKSLEKDKEHLRTNLHKAEEEVKLLFDENNLLEKENKRLLRQHKERNHPDSGGKHTNSPSAKSNKRKSSPRTSSPMERKIDFDVLDSARQPLSPLHNSPDFRMHKK 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3129 325 Coils Coil 116 150 - -
Ssu1g3129 325 PANTHER EARLY ENDOSOME ANTIGEN 1 325 - -
Ssu1g3129 325 Coils Coil 81 101 - -
Ssu1g3129 325 MobiDBLite consensus disorder prediction 290 304 - -
Ssu1g3129 325 PANTHER PLANT PROTEIN MATCH IS: (TAIR:PLANT.1) PROTEIN, PUTATIVE-RELATED 1 325 - -
Ssu1g3129 325 Coils Coil 213 261 - -
Ssu1g3129 325 MobiDBLite consensus disorder prediction 262 325 - -
Ssu1g3129 325 MobiDBLite consensus disorder prediction 272 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3129 Ssu-Chr1 81839474 81841835 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3129 - - gmx:100789907 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2459 6 57868002 57870247 Ssu1g3129 1 81839474 81841835 PCT