Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2442 atgtctaCCTTCCTTTTGAAAATCTGCCTTCTCGTATCTGTCTTTCACATCTCCTTGGCCACGAGGAGGTTGAATGAGCTGGTTCAGGACCCGACTCAGCTGCTTCATTACCACAATGGTCCTCTTCTCTCTGGCAAAATCTCCATTAACCTCATTTGGTACGGTCAGTTCAAACCTTCCCAGAAGGCAATTGTCTCCGATTTCATAACCTCGCTGTCACCCTCCCCCCCTCACAGCACCCAACCATCCCTCGCCACGTGGTGGAAAACCACCGAGAAATACTACCACCTCAGCAGCAGCAAGAAAAAGCCCTCCCCTCCCCTTTCCCTTTCACTAGGTAAACAGATTCTCGACGAGAACTACTCGCTCGGGAAATCCCTCACGAGCAAGCACCTTGTTTCGCTGGCTTCCAAGGGCGACCCCAAAAACGCCATCAACGTTGTCCTAACCTCCGCTGACGTGGCAGTTGAAGGTTTCTGCATGAGCCAATGCGGGACCCACGGTTCTTCCTCGGTGGGCCATACCAAGGGGAAGAACTACAAGTTCGCTTACGTTTGGGTTGGGAACTCCGAGACTCAGTGCCCGGGTCAGTGCGCGTGGCCCTTTCACGAGCCGATTTATGGGCCGCAGGGCCCACCATTGGTTGCGCCGAACAACGACGTGGGCCTGGATGGAATGGTGATCAACCTGGCTAGCCTCTTGGCTGGGACCGTGACGAACCCGTTTGGGAACGGGTTCTTCCAGGGGCCCGCTGAGGCGCCACTCGAAGCCGCGTCAGCGTGCCCTGGGGTTTATGGCAAAGGGGCTTACCCTGGTTACGCTGGGAACTTGCTCGTGGACTCTTCTACTGGTGCTAGCTACAATGCGCACGGTGCTAATGGAAGGAAGTACCTGCTTCCTGCATTGTTTGACCCTTCCACGTCATCGTGTTCCACACTAGTGTGA 945 0.5492 MSTFLLKICLLVSVFHISLATRRLNELVQDPTQLLHYHNGPLLSGKISINLIWYGQFKPSQKAIVSDFITSLSPSPPHSTQPSLATWWKTTEKYYHLSSSKKKPSPPLSLSLGKQILDENYSLGKSLTSKHLVSLASKGDPKNAINVVLTSADVAVEGFCMSQCGTHGSSSVGHTKGKNYKFAYVWVGNSETQCPGQCAWPFHEPIYGPQGPPLVAPNNDVGLDGMVINLASLLAGTVTNPFGNGFFQGPAEAPLEAASACPGVYGKGAYPGYAGNLLVDSSTGASYNAHGANGRKYLLPALFDPSTSSCSTLV 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2442 314 Pfam Phosphate-induced protein 1 conserved region 35 313 IPR006766 -
Ssu6g2442 314 PANTHER PROTEIN EXORDIUM-LIKE 5 3 314 IPR006766 -
Ssu6g2442 314 PANTHER PROTEIN EXORDIUM-RELATED 3 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2442 Ssu-Chr6 57477153 57478097 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2442 - - gmx:100791695 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2442 6 57477153 57478097 Ssu6g2442 6 57477153 57478097 ECH
Ssu6g2442 6 57477153 57478097 Ssu1g3110 1 81486826 81487764 PCT