Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3110 ATGCCAATGGCCTCTCCTGTATCCTCCAGTGTTCTTTTGAGCCTATTCCTCATTATTTCTGTGCTCCATTTGGGCGCAGCAGCAAGAAGTCTTAGTGAAAACGACCAGCAACAACTGCAGTTCCAATACCACAAGGGCCCTCTTCTCAGCGGCAAAATCTCCGTCAATCTCATATGGTACGGTAACTTCAAGCCTTCCCAGCGAGCCATCATCGCCGATTTCATCACCTCCCTTTCCTCCCCAGAATCCACGGCCCAACCATCCGTCGCCACGTGGTGGAAAGCCACCGACAAATACTACCAACTCATAAAGTCACCGAAACCCGCCCTTACCCTTACCCTCACCCTGGGTGCCCAAATCCTGGACGAGAACTACTCCCTTGGAAAATCACTCACCACCGACCACATCGTCAAGCTAGCATCCAAGGGCGCCCCACAAGACGCCATCAACGTGGTTCTCACAGCCTCCGACGTAACCGTAGACGGGTTCTGTTCCAGTAGGTGCGGGACTCACGGTTCCTCGGTGGGTCGTCGCAAGTTCGCTTACGTGTGGGTGGGTAACTCGGAGACGCAGTGCCCGGGACAGTGCGCATGGCCCTTCCACCAGCCCATTTACGGCCCGCAGAGCCCACCCTTGGTTGCGCCCAACAACGACGTGGGCCTCGACGGAATGGTCATCAACGTGGCGAGTCTATTGGCGGGGACCGTTACGAACCCTTTCGGGAATGGCTACTTCCAAGGACCCAAAGAGGCGCCTCTGGAAGCCGCTTCCGCTTGCACTGGTGTGTACGGCAAGGGCGCTTACCCGGGCTACGCCGGGGAACTCCTGGTGGAGCCAACAACTGGCGCTAGCTACAATGCCTACGGCGTCAATGACAGGAAATATTTGTTGCCAGCACTCTTTGACCCAACCACTTCCGCTTGTTCCACTCTAGCATAA 939 0.5623 MPMASPVSSSVLLSLFLIISVLHLGAAARSLSENDQQQLQFQYHKGPLLSGKISVNLIWYGNFKPSQRAIIADFITSLSSPESTAQPSVATWWKATDKYYQLIKSPKPALTLTLTLGAQILDENYSLGKSLTTDHIVKLASKGAPQDAINVVLTASDVTVDGFCSSRCGTHGSSVGRRKFAYVWVGNSETQCPGQCAWPFHQPIYGPQSPPLVAPNNDVGLDGMVINVASLLAGTVTNPFGNGYFQGPKEAPLEAASACTGVYGKGAYPGYAGELLVEPTTGASYNAYGVNDRKYLLPALFDPTTSACSTLA 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3110 312 PANTHER PHOSPHATE-RESPONSIVE 1 FAMILY PROTEIN 3 312 - -
Ssu1g3110 312 Pfam Phosphate-induced protein 1 conserved region 42 311 IPR006766 -
Ssu1g3110 312 PANTHER PROTEIN EXORDIUM-LIKE 5 3 312 IPR006766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3110 Ssu-Chr1 81486826 81487764 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3110 - - gmx:100793598 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2442 6 57477153 57478097 Ssu1g3110 1 81486826 81487764 PCT