Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2425 ATGGTCTCCTTTCACAAAGCGCTGGCCGAGACCCCAATAACACAAGTTCCTGCAGAATTTGAGGCTCCACCAAGGAAGAGAAAGTGGGAAGAGGAGACACTCACCAAAGAATTCTTCAAGCATGATCCAACAGACTCAGAGAAGAGAAAATTCATCTTTGATATAGAGCTACACCATGAGACACCATTACCTTCACAAAAATTGCAACAATACCTCACTATTCAgTCAGGGCAGATACACTTGCGCAACACAATGATGAATGTGAAAACACCAGACTCAGAGAGAAACCCTGATCCTGAAGCACCATCACTTGGTCAAATGAGCCTAGACCTTGAGCTGAACTTGACATGTGAGTCactgaagaaaaaagaagacagTTATTATGAcataaataagaagaagaattctgGTTCCACTGGGAGTACTTTTGGTGAACGTGATCTGTTGATTGAATCAAGCAATTGTAAAAAGGATGATTCGTGCGTTTTAACTCGACCTCCATCGTGGCTATCATCAGAGGGAGATCACAAAGAGATGATTGCAACGGTTTGTATGAGGTGTCACATGTTAGTAATGTTGTGCAAGTCATCCCCAGCTTGTCCTAACTGCAAATTCATGCACCCACCAGATCAGAACCCTTCAAAATTCTTGAAGAGAAAGAAGGTGCAGCCTCTCTTGTGCTAA 684 0.405 MVSFHKALAETPITQVPAEFEAPPRKRKWEEETLTKEFFKHDPTDSEKRKFIFDIELHHETPLPSQKLQQYLTIQSGQIHLRNTMMNVKTPDSERNPDPEAPSLGQMSLDLELNLTCESLKKKEDSYYDINKKKNSGSTGSTFGERDLLIESSNCKKDDSCVLTRPPSWLSSEGDHKEMIATVCMRCHMLVMLCKSSPACPNCKFMHPPDQNPSKFLKRKKVQPLLC 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2425 227 PANTHER F16L1.2 PROTEIN 1 227 - -
Ssu6g2425 227 PANTHER BOMB/KIRA PROTEINS 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2425 Ssu-Chr6 56846059 56847053 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2425 - - gmx:100784445 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2425 6 56846059 56847053 Ssu6g2425 6 56846059 56847053 ECH
Ssu6g2425 6 56846059 56847053 Ssu1g3096 1 81145667 81146418 PCT