Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3096 ATGGTCTCCTTTCACAACGCGCTGGCCGAGGGTCCAAGACCCGAAATTCATGCAGAATTTGAAGCATCATCAAAGAAGAGAAAGTGGGAAGAGCCATTTGCTGAAGATTTCTTCAAGGATCAAACAAGTATAGAGAAAAGGAAATCAGTCTTTGATATAGAGCTTCACCCTGAGACCCCTTTTTCTTCAGATAAATGGCGTCAATACCTCAGTATTCAGTCAGGTCAGATACAGTTGTGTAACACAAGAACAACAACAGAGGACCCCAAAAGAAGCCCGGAAGCACCTCCTTCTGATCACATGAGTTTAGACCTTGAGCTGAATTTGACATGTGAATCACTGAGGAAAAAAGAAGACAGTTATGATAGGAATGAGAAGCAGAGTTCTGGTTCCCCTGGGGGTTTGAGTGAGCGCGAGGATCCGTTTATTGAATCAAGCAAGTGTAAGAAAGATTCAAATGGTATAATTCGCTCTCCCTCGTGGTTGTCATCATCCGAGGATGATTACAAAGAGATGGTTGCAACGGTTTGCATGCGGTGCCACATGCTGGTAATGCTATGCAAGTCATCTCCTTCCTGTCCTAACTGCAAATGCATGAACCCACCTGATCAGAACCCTTCAAAATTCTTGAAGAGAAGGTGCAGTCTCTTCTGCTAG 657 0.4414 MVSFHNALAEGPRPEIHAEFEASSKKRKWEEPFAEDFFKDQTSIEKRKSVFDIELHPETPFSSDKWRQYLSIQSGQIQLCNTRTTTEDPKRSPEAPPSDHMSLDLELNLTCESLRKKEDSYDRNEKQSSGSPGGLSEREDPFIESSKCKKDSNGIIRSPSWLSSSEDDYKEMVATVCMRCHMLVMLCKSSPSCPNCKCMNPPDQNPSKFLKRRCSLFC 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3096 218 PANTHER BOMB/KIRA PROTEINS 1 218 - -
Ssu1g3096 218 MobiDBLite consensus disorder prediction 116 151 - -
Ssu1g3096 218 MobiDBLite consensus disorder prediction 80 103 - -
Ssu1g3096 218 PANTHER F16L1.2 PROTEIN 1 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3096 Ssu-Chr1 81145667 81146418 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3096 - - gmx:100306574 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3096 1 81145667 81146418 Ssu1g3096 1 81145667 81146418 ECH
Ssu6g2425 6 56846059 56847053 Ssu1g3096 1 81145667 81146418 PCT