Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2411 ATGGTGTCAGCCATACGCCCTCACCTGACCCCTTTCTATGTGAAGGGTCGCGTGTATTGTGACCCTTGTCGTGCTGGTTTTGAGACCCCCGCCACCACCTACATTGCTGGTGCCGAGGTTACTCTGCAATGCAATGATAGAATCACAAATAACATTGTGTATAGCAAGAAGGTTCGGACTGATTCCTCGGGATCATATACGATCTTCGTGGACGCAAATCAAGCAAATCAAAATTGTGATGCCAGGCTTGTAACCAGTCCTCTACCTGACTGCAAAGAGCCCACTCCAGGCCGTGACCACTCACGTGTTATTCTCAACCGTTTCAATGGTATTGCCACCAATGATAGATTTGTTAATAGCTTGGGTTTCATGAAGGAAAAGGTTGCATCTGGTTGTGCAAAGATTTTTAGGCGTTACGGAGAGCTCGATAATGAGAATTAA 441 0.4626 MVSAIRPHLTPFYVKGRVYCDPCRAGFETPATTYIAGAEVTLQCNDRITNNIVYSKKVRTDSSGSYTIFVDANQANQNCDARLVTSPLPDCKEPTPGRDHSRVILNRFNGIATNDRFVNSLGFMKEKVASGCAKIFRRYGELDNEN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2411 146 Pfam Pollen protein Ole e 1 like 14 96 - -
Ssu6g2411 146 PANTHER ALLERGEN-LIKE PROTEIN BRSN20 1 145 - -
Ssu6g2411 146 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 1 145 IPR006041 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2411 Ssu-Chr6 56358173 56360797 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2411 - - gmx:100796594 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2411 6 56358173 56360797 Ssu6g2411 6 56358173 56360797 ECH
Ssu6g2411 6 56358173 56360797 Ssu1g3080 1 80531546 80533010 PCT