Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2390 ATGGACCCGTGTCCTTCCTCCAACGCGAACAGCGTGACCGGGTTCTACACGTTCGTGAGCAGGGGGATGGAGGAGCTGGAGCGGGCCTTCCTCGCGAACAACTTCATGTCCATCCAGTTCCTCCAGAGGGTGCTCTCCCTCCTCCGATCCTTCCACACGCAGCTCACGCTTCTCGTCCACAAGCTCCACCTCCCGCTCGGCGACAAGTGGCTCGACGAGTACATGGACGAAACCTCCAAGCTCTGGGAAACCTGCCTCCTCCTCAAAAACGCTATTTCCAACTTCGAACCTTACTACTCTGCTGGCTTCAACCTCGCCTCCTCCCTCGACTCTCACTCCCACCTCTCTCCACAGGTTGTGAGGGCGATATCTGGGTGTCGAAGGGAGGCTTTGGGTTTGGAGGAGCAGAACCGCGCTTTGATGGAGACGAGGATCCACACGCTGTGTCTGCGTTTGGACGAGAGGGTGTCCGTGGAGTCCAAGCTCAACGGCTTCAACGGTTTCAGGGGCGTTCTGTACGCGATGAGGAACGTGAGTTCGATGCTGCTCATGATCCTGCTGCACGGCTTGGTCTACTGCTGGCCGGAGACCTCGGAGTTGGTGGCCGGAGGGTACGACGGGGGGCGGCTGTTTCTGGGGTCGGCGGTGATGGTATCGGCGGCGAGGTTGCGGCAGAGGGTGGCGGCGGAGATGGGCGGCGCGGGGCCGGGGATTTTGTTGTACGAGTTCAGGACGGCGAGGGTGGAGGTGGAGGAGCTGAGAGGGGAATTGGAGGCGGAGGGGGGTGTTGGGGAGAGAGTGGAGAGCGTTAGAGCGTGTTTTGGGGTGCTCAGATCTGGCGCTGAGAACATTATTTGCCAGCTCGATGATTTCTTTGACGAGATTGTGGAGGGGAGGAAGAAGCTTTTGGATTTTTGCAGTCATaggtaa 930 0.5892 MDPCPSSNANSVTGFYTFVSRGMEELERAFLANNFMSIQFLQRVLSLLRSFHTQLTLLVHKLHLPLGDKWLDEYMDETSKLWETCLLLKNAISNFEPYYSAGFNLASSLDSHSHLSPQVVRAISGCRREALGLEEQNRALMETRIHTLCLRLDERVSVESKLNGFNGFRGVLYAMRNVSSMLLMILLHGLVYCWPETSELVAGGYDGGRLFLGSAVMVSAARLRQRVAAEMGGAGPGILLYEFRTARVEVEELRGELEAEGGVGERVESVRACFGVLRSGAENIICQLDDFFDEIVEGRKKLLDFCSHR 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2390 309 PANTHER - 1 309 - -
Ssu6g2390 309 PANTHER BPS1-LIKE PROTEIN 1 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2390 Ssu-Chr6 55545293 55547007 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2390 - - gmx:100805100 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2390 6 55545293 55547007 Ssu6g2390 6 55545293 55547007 ECH
Ssu6g2390 6 55545293 55547007 Ssu1g3059 1 80021297 80022359 PCT