Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3059 atggatccCTCGTCCACCAACTCCAACTCCAACTCCGTGAACGGCTTCTACTCCTTCCTCACGCGAGGAATCGACGATCTAGAGCGACTCTTCCTCAACACCAACTTCATGTCAATCCAATTCCTCCAAAGAGCGCTCTCCCTTCTTCGATCCTTCCACACCCAATTGACCCTCCTCGTCCAAAAGCTCCACCTCCCGGTGGGCGATAAGTGGCTCGACGAGTACATGGACGAAAGCTCCAAACTCTGGGAAGCCTGCCACGTCATCAAGTCCGGCATTTCCGGCATCGAAACCTACTACTCCGCCGCGTTAAACATCACCTCCTCCCTCGATTCCCACCGCTACATCACCCCCCAACTCTCACGCCAGGTTATAAGGGCCATCTCGGGGTGTCGGAGAGAGGCGGTGGGGTTGGAGGAGGAGAACAGGGCGTTGATGGAGACGAGGATTCAGCCTCTGTCTCTGCGGTTCGAGGAGAGGGTGTCGATAGAGTCGAAGCTGAACGGGTTCAACGGGTTCCGCGGGGTGCTGTACGCAATGAGGAACGTGAGCTCGTTGCTGCTGATGATACTGCTGTACGGGCTGGTGTACTGTTGGGGGGAGTCCTCGGATTTCGCGCTGGGGGGTTACGAGGGCTGCTTGTTCCTGGGATCGGCGTTTATGATGTCGACGGCGAGGTTGCAGCAGCGGGTGGCGGCGGAGATCGGGCACATGGGCGGGGCGCAGGGGATGCTGTTGCACGAGTTTCGGAGGTCGAAGGTGGCCGTGGAGGAGCTGAGGGGGGAGTTAGAGAGGAGAGGGTCGCAGGGAGTGGAGTGGGAGAGTGAGGTTGCTATTAGGGAGAGAGTGGAGAATCTCAGAGCCTGTTTTGGGGTTCTCAGATCTGGGGCGGACAACATTGTTGCTCAGCTTGATGATTTCTTTGACGAGATTGTCGAAGGGAGGAAGAGGCTTTTGGACTTTTGCAGTCATAGATAG 978 0.5665 MDPSSTNSNSNSVNGFYSFLTRGIDDLERLFLNTNFMSIQFLQRALSLLRSFHTQLTLLVQKLHLPVGDKWLDEYMDESSKLWEACHVIKSGISGIETYYSAALNITSSLDSHRYITPQLSRQVIRAISGCRREAVGLEEENRALMETRIQPLSLRFEERVSIESKLNGFNGFRGVLYAMRNVSSLLLMILLYGLVYCWGESSDFALGGYEGCLFLGSAFMMSTARLQQRVAAEIGHMGGAQGMLLHEFRRSKVAVEELRGELERRGSQGVEWESEVAIRERVENLRACFGVLRSGADNIVAQLDDFFDEIVEGRKRLLDFCSHR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3059 325 PANTHER - 4 325 - -
Ssu1g3059 325 PANTHER BPS1-LIKE PROTEIN 4 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3059 Ssu-Chr1 80021297 80022359 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3059 - - gmx:100809357 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3059 1 80021297 80022359 Ssu1g3059 1 80021297 80022359 ECH
Ssu6g2390 6 55545293 55547007 Ssu1g3059 1 80021297 80022359 PCT