Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2386 ATGAGCAGTGAAAATCATCACCATCCCCATCATTACTTTTACCATCAGAACCTGCATATCCATCACAGAAGCACATTCCTGCCAATGCTATGTTCAAGGCCATCCATCAAAGATGTGAGTCTTCCACAGTGGAGAGACCAGCCAGGATCCTTCTCCAGTGACCCTTTGTCCCCAAGAATTGGTTGCATGGGTCAGGTGAAGAGGCACAACAAAATAGTTGGACTCCTCACTACCAAAAGTAACACCACCAACATCTCCATTTCCCCTAGTGTCAAGTATTCGAAGCTCAAAAAGCTCTTCTCTGGCAAAAACTTGAGCACCAGCACCACCAATGCTACTGCTCCTCCTGCCTCCAGCTGTGGAAGTAGGCCGCGCGGGAAGGTAAATAGTGCAAATGTGCCAAGGAACCACAAGCACAAGTGTAGTAGGAATGAGAATGTTGTTCCCATAAGCATTGAAAACATGGATCCTCCTCTACCTGTGATCAAGACAGTGCAGAAGCCAGAGGAAGAAAGACAAATGGATAGTCTTTGGAAAAGAAGGTCAGGTGGGGCTGCATTGAGAAGTTTACAGCTTCAACAGATTCACCATCCAAGACATCATCCTCAGCTTACAAGTGTTTGA 624 0.4631 MSSENHHHPHHYFYHQNLHIHHRSTFLPMLCSRPSIKDVSLPQWRDQPGSFSSDPLSPRIGCMGQVKRHNKIVGLLTTKSNTTNISISPSVKYSKLKKLFSGKNLSTSTTNATAPPASSCGSRPRGKVNSANVPRNHKHKCSRNENVVPISIENMDPPLPVIKTVQKPEEERQMDSLWKRRSGGAALRSLQLQQIHHPRHHPQLTSV 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2386 207 MobiDBLite consensus disorder prediction 105 126 - -
Ssu6g2386 207 MobiDBLite consensus disorder prediction 105 142 - -
Ssu6g2386 207 PANTHER MYOTUBULARIN-LIKE PROTEIN 1 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2386 Ssu-Chr6 55153144 55153767 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2386 - - gmx:100806174 370.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2386 6 55153144 55153767 Ssu6g2386 6 55153144 55153767 ECH
Ssu6g2386 6 55153144 55153767 Ssu1g3053 1 79907792 79908400 PCT