Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3053 ATGGGCAATGAAACCCATCACCGTCATCAGTTTTACTATCAGAAAAGCACATTCCTTCCAATACTTTGTTCACGGCCATCCATCAAAGAGGTGACTCTTCCTCGGTTGAGAGACCATTCTACTTCCTCTGGCAACGACCCTTTGTCCCCAAGAATCAGTTGCATGGGTCAGGTGAAGAGAAACAACAAAATAGCCGGCATTCCAACCTCACACAGATTCACTTCCACAACCAAAACCAACACATCCTCCCCGGTTGCCAAATACTGTAAGCTTAAAAGACTCTTCTCTGGCAAGAACTTTGTTATTAGCACCCCCAAAACTACCACCGCCATCTCAACCTGCGGCGGATCAAGGCAGCCGGTGCCAGATGTGCCCAAAACCCAAAGGTGTCCCAGGAATATTGAGAATAACAATAATGTTGTTTGCATAAGCGTTGAGGATATGGATCCTCCTTTGCCTGTGGTCAAAAGAGTGCCCAAATTGGAGGAACCAACGGAGGTGGGTAGTCTCTGGAAAAGAAGATCAGGTACGGGTAGACCACCACTCAAAAATTTACAGCTTCAACAGATTCCTCATCCAAGGATTTCTGTTCCGCCTCCAACTGTTTGA 609 0.4663 MGNETHHRHQFYYQKSTFLPILCSRPSIKEVTLPRLRDHSTSSGNDPLSPRISCMGQVKRNNKIAGIPTSHRFTSTTKTNTSSPVAKYCKLKRLFSGKNFVISTPKTTTAISTCGGSRQPVPDVPKTQRCPRNIENNNNVVCISVEDMDPPLPVVKRVPKLEEPTEVGSLWKRRSGTGRPPLKNLQLQQIPHPRISVPPPTV 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3053 202 PANTHER MYOTUBULARIN-LIKE PROTEIN 1 202 - -
Ssu1g3053 202 MobiDBLite consensus disorder prediction 163 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3053 Ssu-Chr1 79907792 79908400 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3053 - - gmx:100776177 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3053 1 79907792 79908400 Ssu1g3053 1 79907792 79908400 ECH
Ssu6g2386 6 55153144 55153767 Ssu1g3053 1 79907792 79908400 PCT