Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1441 ATGGGTTCTGCTAACGGACTAACTACTACACATGGGAAACAgcctctcttttcttttggattgATATCTGATGTGCAGTACGCTGACATTCCTGATGGTAGGTCATTCCTTGGTGTTCCACGGTACTATAGGCATAGCATTCTTGTGTTACAGAGAGCAGTAAAAGAATGGAATACTAATCAGAGGCACAAGTTTGTGATAAATTTTGGAGATATTGTTGATGGACATTGTCCAAAAGATCAATCTCTTAATACTGTAAAGAAAGTTGTGGATGAATTTGAGATGTTCAAAGGACCAGTGTATCATTTGATTGGCAATCACTGCCTATACAATCTACCTCGAAGTAAGTTACTTCCATTATTAAAGATCCAGAGTTTTGAAGGCCATGCTTACTATGATTTTTCACCGGTACCTGAATATAGATTTGTAGTTATTGATGGCTATGACATAAGCGCAATTGGCTGGCCTCAAGATCATCCAAAAACATTGGAGGCCTTGAAATTCCTCCGGGAGAGGAATCCAAATGAAGACAAGAACAGCCCAACAGGTTTGGTGGGCCTTGAAAGAAGGTTTCTTATGTTCAATGGTGCTGTTGGAAAGGAACAAATGGAATGGTTGAATGGTGTTCTTCAGGAAGCAACAAAATTGAAACAGAAGGTGGTGGTCTGTTGCCATCTGCCCCTAGATCCTGGTGCGTCATCCAAGGAGGCACTGTTATGGAATTATGACGAAGTAATGAATTTGATACACAGATACCCTTGTGTGAAGCTCTGTCTGGCTGGACATGATCACAAAGGAGGACACTCCATTGATTCCCATGGAGTACACCATAGAGTTCTTGAAGCTGCCCTGGAATGTCCTCCTGGCACAGACGCGTTTGGATATGTTGATGTTTATGATGATAGAATATCACTTTATGGTACAGACAGAATGCAGAGTACAGACATGTATTTTCATCCTAAAGCAGATTTGTGA 975 0.4021 MGSANGLTTTHGKQPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSILVLQRAVKEWNTNQRHKFVINFGDIVDGHCPKDQSLNTVKKVVDEFEMFKGPVYHLIGNHCLYNLPRSKLLPLLKIQSFEGHAYYDFSPVPEYRFVVIDGYDISAIGWPQDHPKTLEALKFLRERNPNEDKNSPTGLVGLERRFLMFNGAVGKEQMEWLNGVLQEATKLKQKVVVCCHLPLDPGASSKEALLWNYDEVMNLIHRYPCVKLCLAGHDHKGGHSIDSHGVHHRVLEAALECPPGTDAFGYVDVYDDRISLYGTDRMQSTDMYFHPKADL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1441 324 PANTHER MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE 1 321 - -
Ssu6g1441 324 SUPERFAMILY Metallo-dependent phosphatases 15 314 IPR029052 -
Ssu6g1441 324 CDD MPP_Nbla03831 17 305 IPR041869 -
Ssu6g1441 324 PANTHER - 1 321 - -
Ssu6g1441 324 Gene3D - 12 311 IPR029052 -
Ssu6g1441 324 Pfam Calcineurin-like phosphoesterase 18 265 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1441 Ssu-Chr6 23540288 23541262 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1441 K01517 - gmx:100808714 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1441 6 23540288 23541262 Ssu6g1441 6 23540288 23541262 ECH
Ssu1g2290 1 64700422 64701381 Ssu6g1441 6 23540288 23541262 PCT