Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2290 ATGGTTTCTTCTAATGGACTAGCTACTATGCagcctcttttttcttttggtttgatTTCTGATGTCCAATATGCTGACATTCCTGATGGTCGCTCATTCCTCGGTGTTCCACGGTATTATAGGCATAGTATTCTTGTATTGCGGAGAGCAGTTAAAGAATGGAACACTCATCAGAAGCATAAATTTGTGATTAATTTTGGAGATATTGTTGATGGGTTTTGTCCCATAGATCAATCTCTTGGTACTGTAAAGAAAGTTGTGGACGAATTTGAGATGTTCAGGGGACCTGTGTATCATATGATTGGCAATCACTGCCTGTACAATCTTCCTCGCAGCAAGTTGCTTCCATTATTGAAGATCCAAACTATTGATGGTCATGCATACTATGATTTCTCACCAGTGCCTGAATATAGATTTGTAGTTCTGGATGGCTATGACATCAGCGCCATTGGTTGGCCCCAAGATCATCCAAAAACATTGGAGGCCTTGAAAATCCTAACGGAGAAGAACCCAAATGAAGATAAGAACAGTCCAATAAATTTGGAGGGGCTTGAAAGAAGGTTTCTCATGTTTAATGGAGCCATTGGAAAGGAACAGATGGAATGGTTGGATGGTGTTCTCCTGGAGGCAACAAAATTGAAACAGAAGGTGGTTGTCTGTTGCCATCTGCCACTAGATCCTGGTGCGGCAAATGAGAAGGGACTGTTGTGGAATTATGATGAAGTAATGAATTTGATACACAGATACAATTGTGTTAAGGTCTGTCTTGCTGGTCATTATCATAAAGGCGGATACTCCATTGATTCTCATGGGATACACCATAGAGTTCTTGAAGCTGCTTTGGAATGTCCTCCTGGTACGGATGCATTTGGAAACATTGATGTCTATGATGACAGGATATCACTTGTTGGAACTGACAGAATGGAAAGTACAGACATGCATTTTAATCCCCCAAGTTAA 960 0.399 MVSSNGLATMQPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSILVLRRAVKEWNTHQKHKFVINFGDIVDGFCPIDQSLGTVKKVVDEFEMFRGPVYHMIGNHCLYNLPRSKLLPLLKIQTIDGHAYYDFSPVPEYRFVVLDGYDISAIGWPQDHPKTLEALKILTEKNPNEDKNSPINLEGLERRFLMFNGAIGKEQMEWLDGVLLEATKLKQKVVVCCHLPLDPGAANEKGLLWNYDEVMNLIHRYNCVKVCLAGHYHKGGYSIDSHGIHHRVLEAALECPPGTDAFGNIDVYDDRISLVGTDRMESTDMHFNPPS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2290 319 PANTHER - 1 319 - -
Ssu1g2290 319 SUPERFAMILY Metallo-dependent phosphatases 12 314 IPR029052 -
Ssu1g2290 319 CDD MPP_Nbla03831 14 302 IPR041869 -
Ssu1g2290 319 Gene3D - 9 308 IPR029052 -
Ssu1g2290 319 PANTHER MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE 1 319 - -
Ssu1g2290 319 Pfam Calcineurin-like phosphoesterase 15 262 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2290 Ssu-Chr1 64700422 64701381 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2290 K01517 - gmx:100815255 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2290 1 64700422 64701381 Ssu1g2290 1 64700422 64701381 ECH
Ssu1g2290 1 64700422 64701381 Ssu6g1441 6 23540288 23541262 PCT