Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1408 ATGGAGTCCCCAATCTCAATCTGCGAAACTGAGATCCCTCTTCAAATCCGCAACATCGATGCTTTCACCGCTTCTTACGCCCAATCCCTCCAATCTCTGAGAGCCACAGCACAAGAAACCGCTCGCTGTCAAGTTCAACCAGAAGAGTTTAAAGCTAAACTGAGGGAGGCCGAGGATGATTTGGTCCAAGCACTTGCAGTCAAGACCCGCAAAGAGGCCAAGCGAATGGCTTTGATGGATGCTATTGCTTCTGCAAAGACTAGAGTTGAAGACCTCAACACATGCATTCAGGAGCAGCGAACCAAAAAGCAAGAATATGCCTCATTTATATCTCAACAATCTCTCGcTTTGACAGCATCTGAAGGGAAGTTAAATGAAAGCATTGAACAGAAAGACGAGACACAGGAGGCCATTTCCTGGTACAATAGGGTCCTTGGTCTTCATGTAAAAGGCGGACGTGGGGTAAAATTCACATTcaagaatataaatttgaacaatCCAAATGAGGAGTACTTTTTAACTATCTGCCATGAAAATGATACATACTCATTGTTAAACTGTGAACCTTCCCTCAATGACACCAAAGAGTTGATCCACGAATTAAACAAGACAAATGATCTATTTAAATTTGTCAGAGTAATGAGGAAAAAGTTCCAAGAGGCAGTAGCACAAGGGAGTTTAGTTGTGACAACAGGTGAACATGAAGAATCTGCCTTTAACTCTGCATCTGCTCCAGTTTTATCAATGTCATCTGTTAGAAGTGATTTTCTAGGCAAGGAAAATGAGCATCAAGTTAAACCTACAGAAGGTAATACacaattcaaaaaacaaaaatcatag 840 0.4 MESPISICETEIPLQIRNIDAFTASYAQSLQSLRATAQETARCQVQPEEFKAKLREAEDDLVQALAVKTRKEAKRMALMDAIASAKTRVEDLNTCIQEQRTKKQEYASFISQQSLALTASEGKLNESIEQKDETQEAISWYNRVLGLHVKGGRGVKFTFKNINLNNPNEEYFLTICHENDTYSLLNCEPSLNDTKELIHELNKTNDLFKFVRVMRKKFQEAVAQGSLVVTTGEHEESAFNSASAPVLSMSSVRSDFLGKENEHQVKPTEGNTQFKKQKS 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1408 279 Coils Coil 54 74 - -
Ssu6g1408 279 PANTHER KINETOCHORE PROTEIN SPC25-RELATED 7 271 IPR045143 GO:0007059|GO:0031262
Ssu6g1408 279 Gene3D Chromosome segregation protein Spc25 127 226 - -
Ssu6g1408 279 Pfam Chromosome segregation protein Spc25 151 219 IPR013255 GO:0007059|GO:0031262
Ssu6g1408 279 MobiDBLite consensus disorder prediction 257 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1408 Ssu-Chr6 23083717 23086214 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1408 K11550 - gmx:100776032 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1408 6 23083717 23086214 Ssu1g2258 1 63995385 64000645 PCT