Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2258 ATGTCGTCAATTTGCGACACCGATATGCCGCTTCGACTGCGAAACGTGGACGCTTTCGCCGCTTCTTTCAAAAACTCCCTCCAATCAGTCAGAGCCACCGCACTCGAAACCGCTCGATCTCAATCTGAACTACAAGAGATTAAAGCTAAACTGAGGGAGGCTGAGGATGAATTAGTAAAGGCACTGGCAGTTAAGACTCGGAGAGAGGCGAAGCGAATGGCGTTGAAAGATGCTATTGCTTCTGTGAAGGGAAGAGTTGAAGATCTGAAGACAAGTATTCAGAAGCAGAGAACCAAAAAGGAAGAATGTGCCACGGTTGTATCGCAACACCGTCTTGTTTTGGCAGCATCTGAACAGAAATCAAATGAAAGCAGTGAACATAAAGATGAAGTTGAGGAGGCCATATCTTGGTACAATAGGATCCTTGGTTTTCATGTTGAAGGTGGACGTGGGGTAAAATTCACCTTCAAGAATATTAATGTGGACAGCCCAAATGAGGAGTACTTTTTTACCATCCGTCATGAAGATGATGTGTATACGTTGCTAAATTGTGAGCCATCTCTCAAAGATACTGATGAGTTGATCCATGAATTAAACAAGACAAATGGGCTATTTAAATTTGTCAGAACAATGAGGAAAAAATTCCAAGAAGCAGTGGCACAAGGCAGTCAATCTGTGACAGCAAATGAACATCAAGAATCTGCCTTTATCTCTTCATCTGCTCCAGTTTTATCAATGTCAACCATTAGAAGTTCTTCTCCAACCAAAGTAAATGAGCATCAAGGTGAACCCACCAAAGGTAATACACATATCCAGAAACAAGTCAATCGAAGAAGGGTAAAATCAGCAATTCTATCTCCTGGATCTGCGTCATCTGTTCGTCAATCTCCTCGTTTGAAGGTCAGGAAATGA 912 0.4221 MSSICDTDMPLRLRNVDAFAASFKNSLQSVRATALETARSQSELQEIKAKLREAEDELVKALAVKTRREAKRMALKDAIASVKGRVEDLKTSIQKQRTKKEECATVVSQHRLVLAASEQKSNESSEHKDEVEEAISWYNRILGFHVEGGRGVKFTFKNINVDSPNEEYFFTIRHEDDVYTLLNCEPSLKDTDELIHELNKTNGLFKFVRTMRKKFQEAVAQGSQSVTANEHQESAFISSSAPVLSMSTIRSSSPTKVNEHQGEPTKGNTHIQKQVNRRRVKSAILSPGSASSVRQSPRLKVRK 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2258 303 Gene3D Chromosome segregation protein Spc25 123 223 - -
Ssu1g2258 303 PANTHER KINETOCHORE PROTEIN SPC25-RELATED 5 301 IPR045143 GO:0007059|GO:0031262
Ssu1g2258 303 MobiDBLite consensus disorder prediction 249 303 - -
Ssu1g2258 303 MobiDBLite consensus disorder prediction 249 271 - -
Ssu1g2258 303 Pfam Chromosome segregation protein Spc25 149 216 IPR013255 GO:0007059|GO:0031262
Ssu1g2258 303 PANTHER - 5 301 - -
Ssu1g2258 303 Coils Coil 37 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2258 Ssu-Chr1 63995385 64000645 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2258 K11550 - gmx:100804876 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2258 1 63995385 64000645 Ssu1g2258 1 63995385 64000645 ECH
Ssu6g1408 6 23083717 23086214 Ssu1g2258 1 63995385 64000645 PCT