Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1404 ATGGACATGAAGGGATATTCAGTTTCCTGGACAAAACATAAGAAAGAGCCATTTTTTGCAGCTCATCACACAAGAAGACAACACCAATGCATACAAGCAAATCATGATGCCCCAGAAGAAACAAGTTCACAAAATCATTCCCTGAAATTGGCTGTTTCTACTTCCCAAAATACTCTACTACCTATGCTACCTGCCTTTGTTGTTGCCTTGCTGCTACTTGTTACTTCAATTGGCACAGCATTTTCACACCCCATTGCCTCCAATTCACCTTTGCCAGTCCCCAGTGCTAACCACACTTTGAGACCAGCTGCAGTGTTGCAAAAGTTGAGGAGAATCAGAGCTCACCTGAAGAAGATCAAGAAGCCTGCTGTTAAAACAATTAAGAGTCCAGATGGGGATTTGATAGATTGTGTTTTATCTCATCAGCAACCTGCTTTTGACCATCCTCAGCTCAAAGGGCAAAGACCATTGGATCCACCAGAAAGGCCAAAGGGTCACACCAATGGAGAAACAGTAATAGAGAGCTTTCAGCTTTGGACTGATTCTGGTGAAGCATGCCCTGAAGGAACTGTTCCAATCAGAAGAACAACTGAACAAGATTTTCTACGAGCAAGCTCTATCAGAAGATATGGAAGAAAACCAAGAGGTGTACGGAGGGACTCAACAGGAACTGGTCATGAGCATGCAGTTGTTTTTGTAAATGGAGATCAATACTATGGAGCAAAAGCAAGCATAAACGTGTGGACACCTAGCGTAACAGATCCATACGAATTCAGTTTGTCACAGATATGGGTTATTGCTGGATCGTTTGGTAATGATCTGAACACCATAGAAGCTGGATGGCAGGCATGTCCATATATACTTGTAAGCCCTGAGCTATATGGAGACAACTATCCTAGGTTCTTCACTTATTGGACTACGGACGCATATCAAGCAACTGGATGCTACAACTTACTATGTTCAGGATTTGTCCAAACTAACAACAGGATAGCAATAGGGGCTGCAATCTCCCCAAGATCCATCTATAATGGCAGACAATTTGATATTGGCCTAATGGTTTGGAAGGACCCAAAGCATGGACATTGGTGGCTGGAGTTTGGGTCGGGGCTACTAGTTGGGTACTGGCCAGCATACTTGTTTAGTCACTTGAGAAACCATGCTAGCATGGTACAATTTGGAGGGGAAATTGTGAATTCTCGTTCAAGGGGCTACCACACTGGCACCGAAATGGGTAGTGGCCATTTTGCAGAAGAAGGGTTTAGAAAAGCAGCCTATTTTAGAAACTTACAAGTTGTTGATTGGGACAATAACTTGCTTCCTCTATCAAATATTCACCAGTTGGCTGACCATTCCAATTGCTATGACATAAGGGTGGGATCAAACAATGTTTGGGGAACTTACTTTTACTATGGAGGTCCTGGAAGGAATGTGAGATGTCCATGA 1443 0.4317 MDMKGYSVSWTKHKKEPFFAAHHTRRQHQCIQANHDAPEETSSQNHSLKLAVSTSQNTLLPMLPAFVVALLLLVTSIGTAFSHPIASNSPLPVPSANHTLRPAAVLQKLRRIRAHLKKIKKPAVKTIKSPDGDLIDCVLSHQQPAFDHPQLKGQRPLDPPERPKGHTNGETVIESFQLWTDSGEACPEGTVPIRRTTEQDFLRASSIRRYGRKPRGVRRDSTGTGHEHAVVFVNGDQYYGAKASINVWTPSVTDPYEFSLSQIWVIAGSFGNDLNTIEAGWQACPYILVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPRSIYNGRQFDIGLMVWKDPKHGHWWLEFGSGLLVGYWPAYLFSHLRNHASMVQFGGEIVNSRSRGYHTGTEMGSGHFAEEGFRKAAYFRNLQVVDWDNNLLPLSNIHQLADHSNCYDIRVGSNNVWGTYFYYGGPGRNVRCP 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1404 480 Gene3D - 251 367 - -
Ssu6g1404 480 PANTHER CARBOXYL-TERMINAL PEPTIDASE 47 480 - -
Ssu6g1404 480 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 47 480 - -
Ssu6g1404 480 Pfam Neprosin activation peptide 126 231 IPR025521 -
Ssu6g1404 480 MobiDBLite consensus disorder prediction 145 166 - -
Ssu6g1404 480 Pfam Neprosin 257 473 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1404 Ssu-Chr6 22998717 23001904 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1404 - - gmx:100782442 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2255 1 63960696 63965375 Ssu6g1404 6 22998717 23001904 ECH
Ssu6g1404 6 22998717 23001904 Ssu6g1404 6 22998717 23001904 ECH
Ssu6g1404 6 22998717 23001904 Ssu1g2255 1 63960696 63965375 PCT