Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1373 ATGGAAAGCGCAAGAGTAATGATGCAGACGGACCCGCCACTCGACTCGGCACCATCTTCTCCAAGTTTCAGCAGCCACTGTTCCGAGACCCTCTCTCAGATCGCCGCCAGAGTCATCCACGAAGTCCGCAGCGACCCCGACCACACTCTCTCCGACTCCTCCCAACAAAACGACAACGACGTTGACGTAGGCGACGACTTCGAGTTCTCTTTCGTCCCCAGACACCCCGACTCCTCCCCTGTCTCCGCCGACGACATTTTCTGCAACGGCCAGATCAGACCCATCTACCCTCTCTTCCACCTAAACTCCGTCGCTGACGCTGACGCTTCGTCCATTCCCGCCGAAACGGCTCGTCGTCGACGTTTACCTCTGAGGAAGCTCATGTTCGAGGAGCGAGAGACGGTGGACCCCACCGTCGTAAACGACAGCGACGAGCTCGACGGCGTGGCTGCGGGAACCTACTGCGTGTGGACCCCACCGTGCAAGAAGACAAGCTCGTCGTCCAAGCGGTGGAAGCTTCGGGACCTTCTGGTTCGGAGTCACAGTGATGGCAAGAGGACCAGCAAGGTGGCGCCTAAGCATTCCTCCGCCGACAACGGTGGGGCCGCCGCCAAATTGGTTGGGTTTTTCAGTAACGCGAATGGACTTGGTCGGAATTTGCCACCATTTTCAAGGTAG 678 0.5855 MESARVMMQTDPPLDSAPSSPSFSSHCSETLSQIAARVIHEVRSDPDHTLSDSSQQNDNDVDVGDDFEFSFVPRHPDSSPVSADDIFCNGQIRPIYPLFHLNSVADADASSIPAETARRRRLPLRKLMFEERETVDPTVVNDSDELDGVAAGTYCVWTPPCKKTSSSSKRWKLRDLLVRSHSDGKRTSKVAPKHSSADNGGAAAKLVGFFSNANGLGRNLPPFSR 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1373 225 MobiDBLite consensus disorder prediction 43 64 - -
Ssu6g1373 225 PANTHER - 17 194 - -
Ssu6g1373 225 MobiDBLite consensus disorder prediction 13 29 - -
Ssu6g1373 225 PANTHER DUF1645 FAMILY PROTEIN 17 194 - -
Ssu6g1373 225 MobiDBLite consensus disorder prediction 1 29 - -
Ssu6g1373 225 Pfam Protein of unknown function (DUF1645) 83 193 IPR012442 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1373 Ssu-Chr6 22586905 22587582 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1373 - - var:108339392 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1373 6 22586905 22587582 Ssu1g2229 1 63220268 63221101 PCT