Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2229 ATGccgcagcagcagcagcagcaagaGATGGAAGCTTCTTCTCATCATAACAAGGCATCGCCTTCTCCCAGTTTCAGCAGCTACTCGTCGGAGACACTCGCCGAGATCGCCGCCCGGGTCATCGAGGAGCTCCGGCGCGACCCTCATTCCGTCTCCGACGACGACGCGCTCTTCCCGCCGTGGGAGAACGAGACCGACTCCGCCCCCGAAAAGAACGACCCCTCTGAAGAAAACGACGACTTCGAGTTCGCGTTCGTTTCCCGAGACTTCGGTTCCCCCGTGTCCGCGGACGACATTTTCTCCAACGGCCAGATCAAGCCCATGTACCCAATCTTCGGCGTTCCCTCAAGCGACGCCGTTTCGTCCGTTCCGGACGCGATCCCGGAGGGGACGACGGCGAGACGGCGTCGTCTCCCGCTGAGGAAGCTGATGTTCGAGGAGGGCGAGACGGCGTCGTGCTCGTCGTCAACGGACGAGAGCGTTGACCTGGAGGGGGCGGCGGAAGGCGCGTACTGCGTGTGGACCCCGAATTCGGTTGGGAGGGAGCGCAAGAAGAGCAACTCCACGGGCTCGGCGTCGAAGCGGTGGAAGCTTCGAGACTTGCTTCTGAGATCCCACAGTGACGGCAAGGACAAGCAGCACCAACAACAAGTGCTGTTTCAGATTCCGACGAACAAAGCGGCGCCGAAGCCTCCGCACGAGGCGAAGAACGGAAGCCTGGGAACGGAACACGGGGAACAGAACAGGAGGAAGTCCTTCTTGCCTCACAGGCCAGAGTTGGTTGGACTTTTCGCCAATGTCAATGGGCTCGGTCGGAATTTGCGCCCGTTTTGA 834 0.5911 MPQQQQQQEMEASSHHNKASPSPSFSSYSSETLAEIAARVIEELRRDPHSVSDDDALFPPWENETDSAPEKNDPSEENDDFEFAFVSRDFGSPVSADDIFSNGQIKPMYPIFGVPSSDAVSSVPDAIPEGTTARRRRLPLRKLMFEEGETASCSSSTDESVDLEGAAEGAYCVWTPNSVGRERKKSNSTGSASKRWKLRDLLLRSHSDGKDKQHQQQVLFQIPTNKAAPKPPHEAKNGSLGTEHGEQNRRKSFLPHRPELVGLFANVNGLGRNLRPF 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2229 277 Pfam Protein of unknown function (DUF1645) 96 244 IPR012442 -
Ssu1g2229 277 MobiDBLite consensus disorder prediction 45 79 - -
Ssu1g2229 277 MobiDBLite consensus disorder prediction 237 254 - -
Ssu1g2229 277 MobiDBLite consensus disorder prediction 1 31 - -
Ssu1g2229 277 MobiDBLite consensus disorder prediction 221 254 - -
Ssu1g2229 277 PANTHER DUF1645 FAMILY PROTEIN 18 271 - -
Ssu1g2229 277 PANTHER - 18 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2229 Ssu-Chr1 63220268 63221101 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2229 - - gmx:102660396 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1373 6 22586905 22587582 Ssu1g2229 1 63220268 63221101 PCT