Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1200 ATGGATTTGTGGGTTATTGCAGCCGTTGCTGGAGCTGGGTGCTTAGCTAAATATTTGAACAGGCTTTCAAAGAATGGTGATAATTCATCTCTTTTGTCTTCAGAGGATTCTAGTTCTGAGAATCCTGAGTCCCCAACCCATTCCTTTTGCACACAAGTAGGGAGAGATTGTGTAGATAGAAGGGCTTCAGATGTGAATTCACAGGAGGATGGTCTTTTGGCAATAGAGTTGGCTTCTAACAAAGGGCTTGATGTTGAAAAAGTAAGGCCCTTCTGGAATTGCAATGTGAGTGATGTCCTTTCTGTATCAAACTTTAATGATATTGGAAATGGAAATGAGCAAAGCTCCAATATTGGTGGCAATTGTGGCTTCCTACTTCCTGATTTGTCTGCAGGAAAATTGGGCCATAATCATCCTAGAAAAAAAACCTCCCGGGGGGCATGGCATTTGTATGAGCATGTTAGTAGACCTTCAAATTCCTTAGAAAGTTGCCTAATGGCTCAGCTATGCAAAGAGCATGCCAAAATGGAAGAATCCACCTCCTTGTCATCCACGGCCACGAGATCATTTTTGGTTGGTGATGGAAACCAAATGATCAGCAGAGCAAATGATGATGATTTTTTCAGTGGATTAACTGGAAGTGAAGAATATAGGTTACATAGAAAAGCCAGTAAAGTGAAAGACGAAAGTGTATTATTTGGAATTCCTTCCTTACCCAAAATTGGATCTTCTAATGATGCCAAGAAGATGAAGTTTAATGCAGGCAATGGACAAAGTGGGAGATTGAGCCCTTCCAACAATATGTTCAATGGCTTAACATGTTGA 825 0.4073 MDLWVIAAVAGAGCLAKYLNRLSKNGDNSSLLSSEDSSSENPESPTHSFCTQVGRDCVDRRASDVNSQEDGLLAIELASNKGLDVEKVRPFWNCNVSDVLSVSNFNDIGNGNEQSSNIGGNCGFLLPDLSAGKLGHNHPRKKTSRGAWHLYEHVSRPSNSLESCLMAQLCKEHAKMEESTSLSSTATRSFLVGDGNQMISRANDDDFFSGLTGSEEYRLHRKASKVKDESVLFGIPSLPKIGSSNDAKKMKFNAGNGQSGRLSPSNNMFNGLTC 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1200 274 PANTHER EMB|CAB62613.1 1 266 - -
Ssu6g1200 274 MobiDBLite consensus disorder prediction 29 50 - -
Ssu6g1200 274 MobiDBLite consensus disorder prediction 252 274 - -
Ssu6g1200 274 PANTHER EMB|CAB62613.1 1 266 IPR040348 GO:0008356
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1200 Ssu-Chr6 19548519 19549902 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1200 - - gmx:100776932 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2030 1 57691379 57695105 Ssu6g1200 6 19548519 19549902 ECH
Ssu6g1200 6 19548519 19549902 Ssu6g1200 6 19548519 19549902 ECH