Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2030 ATGGATTTGTGGgttgttgctgctgctgctggAGCTGGGTGTTTGGCTAAATATTGGAACAGGATTTCAAAAAATGGTGATAGCTCGAGTCTATCGTCTTCGGAGGATTCGTGTTTTGAGAATCCTGGCCCCCCTAGCTCCCCCTTTCCGGTTGCCAAACAAGCGCGAAGAGATGAATTGGGCAAAGGTGTTTGTTCTGATGGAAGGGCTTTAGAAGGGAAGTCTTCAGATCTGAACACAATGGAAGGTCTTTTGACAGGAGAAATGGGTTCTAACAGAGGGATTGATAGTGAAAAAATGAGACACTTTCGAAATCATTACAAGCATGATGTTCTATCTATATCAAACTTGGCAATGCCATTATCACCGTATGATGATAACTTCAAGGATGTTGATGTTAATGAGCAAAGCTCGGGCATTGTTGGCAATCATGGTTTCCTTCTTCCTGATTCTTCTGCTGAAGTGTTTCCTATCCATCACTCTTCTGGACATAAAACCATTCTCAGAATGAAGCATTTGTCTGGGCTGGTTAATAGACCTTTAAGTTCCTTAGAAAGTTGCTTTATGGCTCAGCTGTACAAGGAGCATGCCGAAACGCaagaatttgtttttagttctctTTCATCATCATCCACGGCCACAAGGTCATTTCTTGTAAGCAATGGAAGCCAAATAATCAACAGAGCAAATAATAATTTGTCCACCGCGTCAATTGGAAGCAAGGAATATATGTTGCAAAAAGAAGCTGGTCAAGTAAAGGATGAAAATGTGTTTGAGGTTCCTTCCTTACCAAAAATCAGATCTATAGATGATGCTAAGAAGATGAAATTTAATGCGGTCATTGGGAGAAGTCAAAGATTGAGCTCTTCCGACGATGTGTCGAGTGGAAAACTCATCCATACTCAATATGATAAAACGTTTCTCTTCAGTCTTGGGATTTCTTTTGGGATGATAACTTCCATCGTGgcaaataaaagagatatataCAAGTTAAGAGAGTTGTTGAAGCAGACTGAAAACTTGGTTCAAGATCTGCAAGAGGAGCTTGAAATGAAAGATTCAATGACAGTGAAGGAGttacataatgaaaattatgGTTCACGGGATACATGTGATCATTCCTCATATGACAAGGAGCTAAATGAATTTTCCCCTGAAAAGCATGTGGATAACTCTCCAAGAATTGACTCCACAGAATCATATCATCAAAACGTAGAACAAAGTTCAGAATCCATGAGCAAAATTGAAGCTGAGCTTGAAGCTGAACTTGAGAGATTGGGGTTGGACATAAATGCGTCAAGCctagaaagaaaattatccGAGCTTGTTGAGCTTGACCCAGAGTTTGTAGCAGATTTTGCTCAAGGTGAGTTACGAGCTGACATGGTCAGTGGGAAAGATTCCGTCCATCCAAAATCAAATGAGGATGCCAGTGACCCAACACCTCTCCCTGCCAACTATGCAGTTTTGCCTCATGAACTGAGTTTGCGTTTGCATGAAGTAATACAATCCCAACTTGAGCAACGCGTGAATGAGCTTGAGATTGCCCTTGAAAATAGCCAGAGGAAAGTACGGCTTTTGGAATCAAAGCATGAGGGTTATCTCCAAAAGGCATCTTCCTTTAGTAGAGGAAACGATGATGTTGACCTTATGTCCCAGCCCTTAATTCTCAATTTATCAGGTGAAGCTCTAGATGCATACAATGAGGCCTATGAAGAACTAATAAAGATAAACGACTCTGAAGAAAATTCACCATTAGACATGCATGATAGTGACCACAAGGAAGGTTCACATTCACATGACTGGCATGCAATAGTGGTTCAACATGGTGAAGCAAATGATTCTGTAACTTACGGCTCGGTTAGTGCAGGGCAACTCTCAAGGGAGCTCTCTTCTAGTAAGGTAACAATGTTGGAAGGGCACAGCTCTAGCATTTATGAATTAGATGGTACTGAAGATGTAAGTTGTGGTTTTGATAATGAGGTGGAACAGCAATTGATAAGACAAATTGTTGAAAGGACCAAGAAAGGTTCTCCTTCTTTTAAAAATGCACAAAGGATATTGTATTCTATGGATGAAGATGAACAAtga 2091 0.3907 MDLWVVAAAAGAGCLAKYWNRISKNGDSSSLSSSEDSCFENPGPPSSPFPVAKQARRDELGKGVCSDGRALEGKSSDLNTMEGLLTGEMGSNRGIDSEKMRHFRNHYKHDVLSISNLAMPLSPYDDNFKDVDVNEQSSGIVGNHGFLLPDSSAEVFPIHHSSGHKTILRMKHLSGLVNRPLSSLESCFMAQLYKEHAETQEFVFSSLSSSSTATRSFLVSNGSQIINRANNNLSTASIGSKEYMLQKEAGQVKDENVFEVPSLPKIRSIDDAKKMKFNAVIGRSQRLSSSDDVSSGKLIHTQYDKTFLFSLGISFGMITSIVANKRDIYKLRELLKQTENLVQDLQEELEMKDSMTVKELHNENYGSRDTCDHSSYDKELNEFSPEKHVDNSPRIDSTESYHQNVEQSSESMSKIEAELEAELERLGLDINASSLERKLSELVELDPEFVADFAQGELRADMVSGKDSVHPKSNEDASDPTPLPANYAVLPHELSLRLHEVIQSQLEQRVNELEIALENSQRKVRLLESKHEGYLQKASSFSRGNDDVDLMSQPLILNLSGEALDAYNEAYEELIKINDSEENSPLDMHDSDHKEGSHSHDWHAIVVQHGEANDSVTYGSVSAGQLSRELSSSKVTMLEGHSSSIYELDGTEDVSCGFDNEVEQQLIRQIVERTKKGSPSFKNAQRILYSMDEDEQ 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2030 696 MobiDBLite consensus disorder prediction 30 72 - -
Ssu1g2030 696 MobiDBLite consensus disorder prediction 382 413 - -
Ssu1g2030 696 Coils Coil 328 355 - -
Ssu1g2030 696 Coils Coil 564 584 - -
Ssu1g2030 696 MobiDBLite consensus disorder prediction 396 412 - -
Ssu1g2030 696 Coils Coil 405 425 - -
Ssu1g2030 696 PANTHER EMB|CAB62613.1 1 696 IPR040348 GO:0008356
Ssu1g2030 696 Coils Coil 503 537 - -
Ssu1g2030 696 PANTHER EMB|CAB62613.1 1 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2030 Ssu-Chr1 57691379 57695105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2030 - - gmx:100792679 1053.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2030 1 57691379 57695105 Ssu6g1200 6 19548519 19549902 ECH
Ssu1g2030 1 57691379 57695105 Ssu1g2030 1 57691379 57695105 ECH