Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0917 ATGGCCACTGGTGCCACCCCAGATAGAATCTTCTGGTCAGTGTATGAAGGGTGCATATCTGGCTACGATAACTGCGTTGAGCGACGACCCTACCACCGTAACTGTGGTTGTGCACTCCATAACAAGCCATTTAATTGCACGCACAAGCTGCAAAGGTGTAACAATGTGTCATACCCTATGAGGAGGGCTTGGAGTGAAGGGAGCTTGGTCTTGGCAAATTCTTCTTCATCTCCTTCTCAAGTTGCAACTGGGGGAAGGCCCCAATAG 267 0.4981 MATGATPDRIFWSVYEGCISGYDNCVERRPYHRNCGCALHNKPFNCTHKLQRCNNVSYPMRRAWSEGSLVLANSSSSPSQVATGGRPQ 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0917 88 PANTHER HOMEODOMAIN PROTEIN 8, PUTATIVE-RELATED 1 80 - -
Ssu6g0917 88 PANTHER BNAC04G52100D PROTEIN 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0917 Ssu-Chr6 14861765 14862031 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0917 - - pvu:PHAVU_003G175100g 154.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0917 6 14861765 14862031 Ssu1g1794 1 44822617 44822940 PCT