Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1794 ATGGCCACCGGCGCCGCCGCAGACGGGCTCTTCCGGCCGATCTACGCGGGCTGCATTTCCGGCCACGACAACGACGTCGAGCGGCGCCCGTACCACCGCAACTGCGGCTGCGCGCTGCACAGCAAGTCGCGGAACAAGTCGTGCGCGCACAGGGCGCCGCGGTGCAACAGCGTGTCGTACCCCATGAGGAGGGCTTGGAGCGAAGGGAGTTTGGTGATGGCCGCTTCGGCGCATTcgtctccttctccttcttctcccGCTGGGGTCAGGCCTCAACACGAGGAAGAGGGACAGAATGTATCAGGGGTTTTATTTGAGATGTGA 324 0.5988 MATGAAADGLFRPIYAGCISGHDNDVERRPYHRNCGCALHSKSRNKSCAHRAPRCNSVSYPMRRAWSEGSLVMAASAHSSPSPSSPAGVRPQHEEEGQNVSGVLFEM 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1794 107 MobiDBLite consensus disorder prediction 73 107 - -
Ssu1g1794 107 PANTHER BNAC04G52100D PROTEIN 1 99 - -
Ssu1g1794 107 PANTHER HOMEODOMAIN PROTEIN 8, PUTATIVE-RELATED 1 99 - -
Ssu1g1794 107 MobiDBLite consensus disorder prediction 73 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1794 Ssu-Chr1 44822617 44822940 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1794 - - gmx:100817756 154.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0917 6 14861765 14862031 Ssu1g1794 1 44822617 44822940 PCT