Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0915 ATGGAGTCTTTTCATCGATTTAGATTGTGGGTCTTCGTTTTTCTGTGCTCAATGTTCCAATCGGGACATGGGTTTTACCTCCCGGGTAGTTACCCTCACAAGTATGGCGTTGGGGATGAGTTGTGGGTAAAGGTGAATTCTCTCACTTCAATTGATACAGAAATGCCCTTTAGTTATTACAGTTTACCCTTTTGCAAGCCTGAGGGTGGTGTCAAGGACAGTGCTGAGAATCTCGGTGAACTCCTCATGGGGGATCGGATCGAGAACTCGCCTTACAGGTTTAAGATGTACACCAATGAGTCTGAGATATTCCTGTGTCAAGTGGATAAGCTCTCTGCTGATCAGTTCAAGATCTTGAAGAAGAGGATTGATGAGATGTATCAGGTTAATCTCATACTTGATAATTTACCTGCCATTAGGTTTACCAAGAAGGAGGAGTACTTTCTGAGGTGGACCGGGTACCCTGTTGGTATCAAGATTCAGGATGTGTATTATCTGTTTAACCATTTGAGGTTTAATGTCCTTGTCCATAAGTATGAGGAGACCAATGTGGCCCGTGTTATGGGGACCGGCGATGCGGCTGAGATGATCCCGCCGGAGGGATCTGACAAGCCCGGTTACATGGTTGTTGGGTTTGAGGTGATACCTTGTAGTATTATGCATAATGCTGATTCGGTTAAAGGGTTGAAGATGTATAACAAGTACCCCTCACCGATCAAATGTGATCCGTCCATGGTGGCTATGCCTATCAAGGAAGGGCAGCCGGTTGCGTTTACATATGAGGTTACCTTTGAGGAGAGTGATATCAACTGGCCATCTAGATGGGATGCCTACTTGAAGATGGAGGGAGCCAAAGTTCATTGGTTCTCTATCCTCAATTCGCTTATGGTGATCACTTTTCTTGCTGGTATTGTTCTTGTTATCTTCCTGAGGACTGTTAGGAGGGATCTGACCCGGTATGAGGAGCTTGATAAGGAGGCGCAAGCACAGATGAATGAGGAGTTATCTGGTTGGAAGCTTGTTGTGGGGGATGTTTTCCGCGCCCCATCGAATCCTGCTTTGTTGTGTATAATGGTTGGGGATGGAGTTCAGATTTTGGGGATGGCTGTTGTGACAATTTTGTTTGCTGCTCTTGGATTCATGTCGCCGGCCTCTCGCGGAACACTTATCACAGGTATGCTGTTTTTCTACATGATACTTGGTGTTGCTGCTGGTTATGTTGCAATTCGGCTGTGGAGGACAATTGGCTGTGGTGATAACAAGGGATGGATTTCAGTTGCATGGAAGGCTGCTTGTTTCTTCCCTGGTATAGCCTTTTTGATCCTCACAACCTTGAACTTCCTATTGTGGGGAAGCCACAGCACAGGAGCCATTCCATTTTCACTCTTTGTTATACTGATTTTGCTTTGGTTCTGCATTTCTGTGCCCCTTACTCTTATTGGTGGGTTCTTTGGAGCAAGGGCACCTCACATTGAGTATCCAGTTCGAACCAATCAAATTCCTCGAGAAATTCCCCAGCAGAGGTACCCATCATGGCTTTTGGTTCTTGGTGCCGGCACCCTTCCATTTGGTACCTTGTTCATCGAGCTCTTCTTCATCATGTCCAGTATTTGGATGGGTCGCGTTTACTATGTATTTGGATTTCTCTTCATTGTTTTGATTCTTCTTGTGGTGGTCTGTGCTGAGGTGTCTCTAGTTCTAACATACATGCACCTCTGTGTGGAGGACTGGAGATGGTGGTGGAAATCATTCTTTGCCTCTGGTTCTGTTGCCATATACATCTTTTTGTACTCCATAAACTATCTTGTGTTTGACCTCAAGAATCTGAGTGGGCCTGTTTCTGCAACTCTTTACTTGGGATATTCCCTCTTCATGGTTCTGGCAATCATGTTGGCTACAGGCACAGTTGGGTTCCTTTCCTCATTCTGGTTCGTGTATTACTTGTTCTCTTCAGTCAAGTTGGATTGA 1968 0.4533 MESFHRFRLWVFVFLCSMFQSGHGFYLPGSYPHKYGVGDELWVKVNSLTSIDTEMPFSYYSLPFCKPEGGVKDSAENLGELLMGDRIENSPYRFKMYTNESEIFLCQVDKLSADQFKILKKRIDEMYQVNLILDNLPAIRFTKKEEYFLRWTGYPVGIKIQDVYYLFNHLRFNVLVHKYEETNVARVMGTGDAAEMIPPEGSDKPGYMVVGFEVIPCSIMHNADSVKGLKMYNKYPSPIKCDPSMVAMPIKEGQPVAFTYEVTFEESDINWPSRWDAYLKMEGAKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPSNPALLCIMVGDGVQILGMAVVTILFAALGFMSPASRGTLITGMLFFYMILGVAAGYVAIRLWRTIGCGDNKGWISVAWKAACFFPGIAFLILTTLNFLLWGSHSTGAIPFSLFVILILLWFCISVPLTLIGGFFGARAPHIEYPVRTNQIPREIPQQRYPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGRVYYVFGFLFIVLILLVVVCAEVSLVLTYMHLCVEDWRWWWKSFFASGSVAIYIFLYSINYLVFDLKNLSGPVSATLYLGYSLFMVLAIMLATGTVGFLSSFWFVYYLFSSVKLD 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0915 655 Pfam Endomembrane protein 70 56 607 IPR004240 GO:0016021
Ssu6g0915 655 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 10 655 - -
Ssu6g0915 655 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 10 655 IPR004240 GO:0016021
Ssu6g0915 655 Coils Coil 310 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0915 Ssu-Chr6 14814243 14816210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0915 1 655 Miscellaneous Gene Families AT5G35160 85.736 0.0 1144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0915 K17086 - gmx:100802084 1288.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0915 6 14814243 14816210 Ssu1g1795 1 44864287 44865774 PCT