Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0912 ATGGACGCCGCAGCAACAGGTTCGGAGCTGAACAAGTCCGGGAGCGGAGGCTCGGAGCGAAACGAGGACAGCAGAGGGATATTTGAATACTTTGGCTGGGTTTACCACTTGGGAGTCAATTCCATTGGCCATGAGTACTGTCATCTCCGATTCCTCTTCATTAGGGGCAAGTATGTTGCCATGTACAAGCGTGATCCTCACGATCACCCTGGCCTCAAACCCATTAGAAAGGGAGTTGTAGGACCCACACTAATGGTGGAGGAGCTAGGTCGTCGAAAGGTCAACATTGGGGATCTTTATGTTTTGCGGTTTTACAATCGATTAGATGAGACCAAAAAGGGAGAAATTGCTTGTGCTACAGCTGGGGATGCCAGGAGATGGATGGAAGCATTTGATCAGGCCAAGCAACAGGCTGAATATGAACTGTCAAGAGGAGTAAGTGCCAGAGACAAACTAAACATGGAGGCTGAGATCAATCTTGAAGGACATCGACCTAGAGTGAGGCGATATGCCCATGGGTTGAGGAAGCTTATAAGAATTGGCCAAGGCCCAGAGACACTGTTACGACAATCATCAAAGTTGGCAGCTAGGCCAGATGCATTTGAAGGGGACAGTGGAGATGCAGTTGAAGCCCATCAATGGAAATGTGTTTGTACTATGACtgGTATTAGAATTTTTGAGGATGTTTCTGATCACAAGAATGGTAAGGGTATCCTTGCAAAGTCTGTTGGTGTTATTGATGCAACTGCAGATACTGTTTTTGAAGTGATTTTGAGCACTGAACAACAGAAAAGATATGAGTGGGATACATTGATGTGCGACTTGGAGCTGGTAGATTCTTATGATGGACACTACGATGTTGTTTATGGGACATATGATTCTAAGTATCTATCTCGGTGGCACTCAAAGCAGGATTTTGTCTTCTCTAGGCGATGGTTTCGCGGACAAGATGGAACATACACTATCTTGCAATTTCCAGCTATACATAAGAAAAAGCCTCAGAGATCTGGATATCGACGTGCTAAAGTTAATCCATCTTCGTGGGAGATTAGAAATTTGAACACATCTATGGCATCAAATAGCCCTAGATGTTTAGTGACCCACACTTTAGAGATTCACTGTGTGTCTTGGTGCCGATGGAAGAACAACCAGAGCTCAAAATTTGAGAGGAGCATTCCTTATGCACTATTGTGCCAAGTGGCAGGTCTGAAGGAATACATTGCAGCCAATCCTGCACTCCTCCGTGAAAATGCCACCACAATTGTTCATTCCAAAATCTCTGATGCTTCTATTTCCAGTACTGAATATGAGGATGAAATGCAGGATGAGTTTTATGATGCAATTACTGCTGATTCGTCAACTTCAGATGAAGAAAGTGATGATGATCAGAAACTTGTTGTGCAGGAGCCAAGAGTCAAACTAAAGAATATTTCATGGGCAATCACAACCTTGGCTTTGAAGCGAACTGCAGCTCCCAATCTAAGCGAAGAATTGGATCCTCATGTAACTCATATCACAATTCCAAGTGACTTGCATGGTTCTTTGCACAAAGGAAAGGATGATAATGACACAAACTGTTGGACTTCTCCTAGCGGAAAAGGATTTATGATTAGAGGAAAGAACTATCTTAAAGATAATTCTAAGGTAGTTGGAGGAGATCCTCTTCTCAGGCTTGTAGCAGTCGATTGGTTTACAGTTGAAAAGTCCGTAGATAGAATTGCCCTTCACCCTAAATTTTTGGTTCAGTCAGAAGCCGGGAAAAAGCTTCCATTTATTCTTGTCATTAATCTCCAGGTTCCTGCGAGACCAAACTACAGTCTGGTTCTGTATTATGCAGCTGACAGAccgataaataaaaattctctgttAGCTAAGTTTGTTGATGGAAGTGATGCGTTTCGGGACTCAAGATTCAAACTTATTCCAAGTATAGTTGAGGGGTATTGGATGGTCAAGAGAGCTGTAGGAACCAAAGCTTGCCTCTTAGGAAAAGCTGTGACTTGTAAATACTTTAGACAAGATAATTTTTTGGAGATTGACGTGGACATTGGATCTTCTTCTGTAGCCAGGAGTGTCATTGGCCTTGTCCTGGGATATGTTACAAGTCTAGTCGTTGACCTTGCAATTTTGATAGAGGCAAAAGAAGAGGCAGAACTCCCAGAGTACATTCTTGGAACTGTCCGATTAAACCGTTTGAAACTTGAATCTGCTGTACCATTTGAGGTTTAA 2229 0.4253 MDAAATGSELNKSGSGGSERNEDSRGIFEYFGWVYHLGVNSIGHEYCHLRFLFIRGKYVAMYKRDPHDHPGLKPIRKGVVGPTLMVEELGRRKVNIGDLYVLRFYNRLDETKKGEIACATAGDARRWMEAFDQAKQQAEYELSRGVSARDKLNMEAEINLEGHRPRVRRYAHGLRKLIRIGQGPETLLRQSSKLAARPDAFEGDSGDAVEAHQWKCVCTMTGIRIFEDVSDHKNGKGILAKSVGVIDATADTVFEVILSTEQQKRYEWDTLMCDLELVDSYDGHYDVVYGTYDSKYLSRWHSKQDFVFSRRWFRGQDGTYTILQFPAIHKKKPQRSGYRRAKVNPSSWEIRNLNTSMASNSPRCLVTHTLEIHCVSWCRWKNNQSSKFERSIPYALLCQVAGLKEYIAANPALLRENATTIVHSKISDASISSTEYEDEMQDEFYDAITADSSTSDEESDDDQKLVVQEPRVKLKNISWAITTLALKRTAAPNLSEELDPHVTHITIPSDLHGSLHKGKDDNDTNCWTSPSGKGFMIRGKNYLKDNSKVVGGDPLLRLVAVDWFTVEKSVDRIALHPKFLVQSEAGKKLPFILVINLQVPARPNYSLVLYYAADRPINKNSLLAKFVDGSDAFRDSRFKLIPSIVEGYWMVKRAVGTKACLLGKAVTCKYFRQDNFLEIDVDIGSSSVARSVIGLVLGYVTSLVVDLAILIEAKEEAELPEYILGTVRLNRLKLESAVPFEV 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0912 742 CDD START 210 368 - -
Ssu6g0912 742 Pfam START domain 230 377 IPR002913 GO:0008289
Ssu6g0912 742 SUPERFAMILY Bet v1-like 207 371 - -
Ssu6g0912 742 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 17 742 IPR045096 -
Ssu6g0912 742 Gene3D - 207 410 IPR023393 -
Ssu6g0912 742 MobiDBLite consensus disorder prediction 1 22 - -
Ssu6g0912 742 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 527 732 IPR009769 -
Ssu6g0912 742 ProSiteProfiles START domain profile. 214 367 IPR002913 GO:0008289
Ssu6g0912 742 PANTHER PLECKSTRIN-LIKE (PH) AND LIPID-BINDING START DOMAIN PROTEIN 17 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0912 Ssu-Chr6 14770233 14789541 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0912 - - gmx:100801191 1397.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0912 6 14770233 14789541 Ssu6g0912 6 14770233 14789541 ECH
Ssu6g0912 6 14770233 14789541 Ssu1g1802 1 45056278 45113932 PCT