Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1802 ATGGAATCGTCGAGTGGAGGAGGATCTGAATCTGATCGCGGCGAAGAGAAAGGGATATTTGAATACTTTGGTTGGGTTTATCACCTTGGCATCAATTCCGTTGGTCGCGAGTACTGTCACCTCCGATTCCTCTTGGTCAGGGGCAAGTGCGTCGCCATGTACAAGCGTGACCCTCACCAGAACCCTGACATTACGCCCATTAGAAAGGGAGTCATAGGTGCTACACTAGTGGTGGAGGAGCTAGGACATCGGAAGGTCAACAATATTGGGGATCTTTATGTAATACGACTCTACAGTCGATTAGATGAGAGCAGAAAGGGAGAAATTGCTTGTGCCACAGCTGAGGAGGCCCAAAAATGGATGGAAGCATTTGATCATGCCAAGCAACAGGTTGAGCATGAGTTGTCAACAGAAAGTAGTGCTAGAGATAAACTAATCCAGGAAATGGaGATCAATCTGCTAGGAAATCGACATAGAGTGAGACGGTATGCCTCTGGGTTGAGGAAACTTATAAAAATTGGCCAAGGCCCAGAGACACTCTTACGTCGATCATCAAAGTTTTTTGGTAGTTCAGATGGGTTTGAAGGGGACAATGGAGATGCATTTGAAGCACATCAATGGAAATGTGTCCGTACCATGTCTGGCATTAGAATCTTTGAGGACGTTTCCAATCACAAGAATGGTAAGGGTGTCCTCGTTAAGTCAGTTGGTGTTATTGATGCAACTGCAGATGCTGTTTTTGAAGTGTTTTTAAACATTGAACGACAAAAAAGATATGAGTGGGATATGTTGATGGGTGACTTGGAGTTGGTAGAGTCTTATGATGGACATTATGATGTTGTCTATGGAACATACGATCCTAAGTATCTAACCCGGTGGCATTCAAAGCGAGATTTTATCTTCTCTAGGCAATGGTTTCGGGCACAAGATGGAAAATACACTATCTTGCAATTTCCATCTATACATAAGAAAAAGCCTCCAAGATCAGGATATCGACGTACAAAAATTAATCCATCTACATGGGAGATCAGAAATTTGAACACACCTATGGGATCAGATAGACCAAGATGTTTAGTGACCCACACTTTAGAGATACACTCTGCATCCTGGTATCGATGGAAGAATAGCCAATCAAGCACAAAATTTGAGAAGAGCGTCCCTTATGCATTGTTGTGCCAAGTGGCAGGTCTAAAGGAATATATTGGAGCCAATCCAGCAGTCCTCCAACAATATGCCACTACTGTTGTTCATTCTCAAATCTCCAATACTTCTATGTCCAGTTCTGAATTTGTAGATGCAAAAGTGCAAGATGAGTTTTATGATGCAATCGCCGCTGAGTCATTGTCATCGGATGAAGAAAGTGATGAGGATAAGGAACTAGATAAGGAGCAAAGAGTCTTCACAACCTTAGATTTGAAGCGAACAGCAGCTCCACATCTAAGCAAAGAATTAGATCCCCATGCAAGTCCTATCACAATTGATGTGAGTGACATGCATGGTTCTTTGCGCAAAGGTGAGAATGAGAAGGACACAAACTGTTGGACTTCTCCTGGTGGTGAAGGATTTATGGTTAGAGGAAAGAACTATCTGAAAGATAATTCTAAGGTAGTTGGAGGAGATCCTCTTCTCAAGCTCATAGCAGTTGATTGGTTAAAGGTTGACAAATCTGTAGACAGAATTGCACTGCACCATAGAAGTCTGGTtcaaTCAGAAGCGGGGAAAAATCTTCCATTTGTCCTTGTATTTAATCTACAGGTTCCAGCTAAACCAAACTACAGCTTGGTTATATATTATGCATCTGACAGACCTATAAACAAAGATTCTCTATTGGCTAAGTTTTTGGATGGAAATGACATGTTTCGGGACTCAAGATTCAAACTAATTCCAAGCATAGTTGAGGGATATTGGATGGTCAAGCGAGCTGTCGGAACAAAAGCTTGCCTATTGGGGAAAGCTGTAACTTGTAAATACTTTAgacaagataatttttttgagATAGATGTAGATATTGGATCATCCTCTGTTGCTAGGAGTGTCGTTGGCCTTGTTATGGGATATGTCACAAGCCTAGTCGTTGACCTTGCAATTTTGATAGAGGCAAAAGAAGAATCAGAGCTGCCAGAGTACTTACTTGGAACTGTCCGATTAAACCGCATAAAACTTGAATCTGCTGTACAATTGGAGGTTTAA 2190 0.4146 MESSSGGGSESDRGEEKGIFEYFGWVYHLGINSVGREYCHLRFLLVRGKCVAMYKRDPHQNPDITPIRKGVIGATLVVEELGHRKVNNIGDLYVIRLYSRLDESRKGEIACATAEEAQKWMEAFDHAKQQVEHELSTESSARDKLIQEMEINLLGNRHRVRRYASGLRKLIKIGQGPETLLRRSSKFFGSSDGFEGDNGDAFEAHQWKCVRTMSGIRIFEDVSNHKNGKGVLVKSVGVIDATADAVFEVFLNIERQKRYEWDMLMGDLELVESYDGHYDVVYGTYDPKYLTRWHSKRDFIFSRQWFRAQDGKYTILQFPSIHKKKPPRSGYRRTKINPSTWEIRNLNTPMGSDRPRCLVTHTLEIHSASWYRWKNSQSSTKFEKSVPYALLCQVAGLKEYIGANPAVLQQYATTVVHSQISNTSMSSSEFVDAKVQDEFYDAIAAESLSSDEESDEDKELDKEQRVFTTLDLKRTAAPHLSKELDPHASPITIDVSDMHGSLRKGENEKDTNCWTSPGGEGFMVRGKNYLKDNSKVVGGDPLLKLIAVDWLKVDKSVDRIALHHRSLVQSEAGKNLPFVLVFNLQVPAKPNYSLVIYYASDRPINKDSLLAKFLDGNDMFRDSRFKLIPSIVEGYWMVKRAVGTKACLLGKAVTCKYFRQDNFFEIDVDIGSSSVARSVVGLVMGYVTSLVVDLAILIEAKEESELPEYLLGTVRLNRIKLESAVQLEV 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1802 729 SUPERFAMILY Bet v1-like 199 365 - -
Ssu1g1802 729 CDD PH 24 124 - -
Ssu1g1802 729 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 514 719 IPR009769 -
Ssu1g1802 729 CDD START 203 370 - -
Ssu1g1802 729 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 9 729 IPR045096 -
Ssu1g1802 729 Pfam START domain 226 366 IPR002913 GO:0008289
Ssu1g1802 729 ProSiteProfiles START domain profile. 207 360 IPR002913 GO:0008289
Ssu1g1802 729 Gene3D - 201 390 IPR023393 -
Ssu1g1802 729 PANTHER PLECKSTRIN-LIKE (PH) AND LIPID-BINDING START DOMAIN PROTEIN 9 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1802 Ssu-Chr1 45056278 45113932 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1802 - - gmx:100786048 1208.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0912 6 14770233 14789541 Ssu1g1802 1 45056278 45113932 PCT