Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0713 ATGGCGGAATTGAACACTCTGGTGGTGCGGAAGCCCTGTTTTGGCCTCCCAACTGGTTGCCCTCAATGCCTCTCTGCATACATCTATCTCAAATTTGCTCAAATTCCCTTCCACTTGGACTTCCACCTCAACCACCCTCATTCTGaTCAAATTCCTTATTTTGAGGTTGGTGACTGTGTGGCTTATAATAATGAGAAAGAGGGGATCATTGAGTGCTTGAAGAAGGATGTTGGTGTTGTTGATTTAGACAGTGGGGTTTCTTCACTCCCCGATTGGATTTCAACCAAAGCAATTCTCACCACTTGGCTTGCTGATGCACTTGCCTATGAACTCTGGCTGGGGTGTGAAGGTTCCTCTGCTTATAGCATCTATTATTCTGATCTTCCGTGGCCATTGGGGAAGATTCTCTTTTGGAAGAAGGCTCATTGGGTAAAGCTGAAACATGGGATAACTAATGACAATGCTGAAGTGAAGAAAGAAgagATTTATGAGAGAGCAAAGTCTGCATATGATGCCTTGTCAAGCTGCTTAGGTGAACAGAGTTACTTATTTGAGAACAGGCCATCCAGCTTGGATGCTATTTTTCTTGCACATGGATTAGTTGTGCTTCAAGCATTACCTGAATCTTCAATGCTGCGGATCAACTTTTCAGAGCATGCTAATTTAGTTAGATATGTGCAACAGTATAAGACAGAACTTATAGAAGCTGCTCCATCTCCTTCCTCTGGCCCACAATTTCATATTGATGTATCATCGTCTGCTTCCAGAAGTCATTCAAgttcAAAGCCTAAGAGTAAACCCAAAAGGGAGAAAACACAGGAGGAGAAAACCTTCAAAAAGAAGGCCAAATATTTTGTGGTAGCACAATTGGTTGCAGTTGTTGTTTTCCTCACACTTATGACTACATTTGATGATGCTGAAGTGGACTTAGATGATGCTGATGGTGGTAGTTATGATTATGATGAATGA 969 0.4169 MAELNTLVVRKPCFGLPTGCPQCLSAYIYLKFAQIPFHLDFHLNHPHSDQIPYFEVGDCVAYNNEKEGIIECLKKDVGVVDLDSGVSSLPDWISTKAILTTWLADALAYELWLGCEGSSAYSIYYSDLPWPLGKILFWKKAHWVKLKHGITNDNAEVKKEEIYERAKSAYDALSSCLGEQSYLFENRPSSLDAIFLAHGLVVLQALPESSMLRINFSEHANLVRYVQQYKTELIEAAPSPSSGPQFHIDVSSSASRSHSSSKPKSKPKREKTQEEKTFKKKAKYFVVAQLVAVVVFLTLMTTFDDAEVDLDDADGGSYDYDE 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0713 322 Pfam Glutathione S-transferase, C-terminal domain 166 228 IPR033468 -
Ssu6g0713 322 CDD GST_C_Metaxin 161 226 - -
Ssu6g0713 322 PIRSF Metaxin 1 316 IPR017410 GO:0001401|GO:0007005
Ssu6g0713 322 PANTHER METAXIN RELATED 1 318 - -
Ssu6g0713 322 SUPERFAMILY GST C-terminal domain-like 126 229 IPR036282 -
Ssu6g0713 322 MobiDBLite consensus disorder prediction 237 275 - -
Ssu6g0713 322 Pfam Glutathione S-transferase N-terminal domain 21 113 IPR012336 -
Ssu6g0713 322 MobiDBLite consensus disorder prediction 244 260 - -
Ssu6g0713 322 PANTHER PROTEIN, PUTATIVE-RELATED 1 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0713 Ssu-Chr6 11250524 11253618 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0713 K17776 - gmx:100786767 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0713 6 11250524 11253618 Ssu6g0713 6 11250524 11253618 ECH
Ssu6g0713 6 11250524 11253618 Ssu1g1469 1 33947430 33956639 PCT