Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1469 aTGGCAACGGAAGCGAATGAGAGCACACAAAGGAACACCCTTGTCGTTAGAAAGCCATGTTTTGGCCTCCCAACCGGTTGCCCTCAATGCCTGTCTGCTTACATCTTTCTCAAGCTCTCTCAACTTCCCTTCAACTTAGACTACCACCCTAACTACCCTGATTCTGATCAGATTCCTTACTTTGAGGCTGGTGATTGTGTGTCATATAATAATGAGACGGAGGGGATCATTGAGTGCTTGAAAAGGGATGTGGGTGATTTAGATAGTGGGGTTTCTTCTCTCCCTGATTGGATACCAACCAAAGTGATGCTCACCACTTGGCTTGCTGATGCACTTGAGTATGAACTGTGGGTGGGATGTGACAGTTCCTCTGCTTATAATATCTATTATTCTGACCTCCCCTGGCCTATAGGAAAGGTCTTGTTTTGGAAGAAAGCTCTCTGGGTAAAGCAGAAACATGGGATAAATAAAGACAATGCTGAAGTAAAGGAAGAAGAGATTTATGAGAGAGCAAACTCTGCATATGATGCTCTGTCGACTTGGTTAGGGGAACAAAGCTACCTTTTTGAAGACAGTCCATCGAGCTTGGATGCTATTTTTCTTGCACATGCATTAGTCGTTCTTCAAGCTTTACCTGAATCATCAATTTTGCGCACCAATTTTTTGGAACATGCCAATTTAGTGAGATATGTGCAACAATGTAAGACAGAACTTATAGAAGCTGGTACTTCTCGTTCCAATGATCCATATTTTCATGCACACCCATCATCATCAGCATCTAGAAGTCGTTCAACTTCAAGTTCAAAGCCCAAGAGTAAACCCAAAAGAAAGCCACAAACAAAGGAGGAGAAAACCTTTAGAAGAAGGGCTAAATATTTTGTGGTAGCACAGCTGGTTGCTGTGGTTCTTTTCCTCAGTGTCATGTCTGGATATAGTAATAATGCTGACGTGGAGTTAGACGATGGTGATGTAGGCTATGGTTACAATGAATGA 993 0.424 MATEANESTQRNTLVVRKPCFGLPTGCPQCLSAYIFLKLSQLPFNLDYHPNYPDSDQIPYFEAGDCVSYNNETEGIIECLKRDVGDLDSGVSSLPDWIPTKVMLTTWLADALEYELWVGCDSSSAYNIYYSDLPWPIGKVLFWKKALWVKQKHGINKDNAEVKEEEIYERANSAYDALSTWLGEQSYLFEDSPSSLDAIFLAHALVVLQALPESSILRTNFLEHANLVRYVQQCKTELIEAGTSRSNDPYFHAHPSSSASRSRSTSSSKPKSKPKRKPQTKEEKTFRRRAKYFVVAQLVAVVLFLSVMSGYSNNADVELDDGDVGYGYNE 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1469 330 PANTHER PROTEIN, PUTATIVE-RELATED 11 326 - -
Ssu1g1469 330 PANTHER METAXIN RELATED 11 326 - -
Ssu1g1469 330 MobiDBLite consensus disorder prediction 245 267 - -
Ssu1g1469 330 Pfam Glutathione S-transferase, C-terminal domain 171 233 IPR033468 -
Ssu1g1469 330 SUPERFAMILY GST C-terminal domain-like 156 235 IPR036282 -
Ssu1g1469 330 CDD GST_C_Metaxin 166 231 - -
Ssu1g1469 330 MobiDBLite consensus disorder prediction 245 284 - -
Ssu1g1469 330 Pfam Glutathione S-transferase N-terminal domain 28 118 IPR012336 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1469 Ssu-Chr1 33947430 33956639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1469 K17776 - gmx:100809392 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1469 1 33947430 33956639 Ssu1g1469 1 33947430 33956639 ECH
Ssu6g0713 6 11250524 11253618 Ssu1g1469 1 33947430 33956639 PCT