Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0712 ATGGGATGTTCTCAATCAAGGTTGGAGGATGAAGAGGCAGTTAAGCTTTGCAAAGATAGAAAGCGATTCATCAAACAGGCCGTTGAGCAAAGAACTCAATTTGCCACTGGACATGTAGCATACATTCGGTCTTTGAAAAGGGTTTCAGCAGCACTGCGTGATTACTTTGAAGGCAGTGATCCATGTGAGATGCCATTGGATTCATTCATAACCACACCTTTCACACCCGTGAAGAAAACTAGTCCTAGCTTCATTCCCATATCATCAAAATCCTTCACCCCAACAACAATTGAGTTTGCACCCAAAACaactttgaaggtgaattaccTAAGGCCAGGTGGTAATCCGGCAATTTCAGTTGAGGAAAGGCCTCAGTCGCCCGAAATGGTTCGAGTTGAAATGTATTCTCCCATGCACCAGTTTGGCATTGATGGTTTTTTTCCTATGCAATCCTCACCTATGAATCCCTCAATATTTGCTTATTCTCCCAATAACAGGCCTAATATCCCTCCACCTTCACCTCAATCTTCCCAATGGGATTCCTTTTGGAACCCATTTTCATCATTGGACTATTATGGTTACCCCACCCGAAGTAGCCTTGACCAGACTGGAATGGATGATGAGACCAGAGGACTGAGGCAGGTCCGAGAAGAAGAAGGAATACCGGACCTGGAAGAAGATGAAACTGAACAAgaagattttgttgaaaagagAAATGTAGCAGAAGGAAGAGCCAAAACTGATGTAAACCCCTCCAAAGAAGAAGTCACTGTTGAAGATGTTGATGAACACAAGGAGGACGAGGAAGAGAAGGGAACGGAAGCTGAAACTGGAACTGCGAATGAAGTCACAGAGTCACAAGCCAACGGGGGTGAATGTTTTCAAGTATCTAAAGCTCAAACTACAGGTCAGGAAATGGCAACTGGTAATCAAGAAGCTAAGGAAGAAACACCTGATTTTACTGTTTATGTAGACCGAAGGCCCACAAGCATGGCTGAAGTGATCAGGGATCTTGAAGCTCAATTCACAATAATATGCAATGCAGCCAGTGGTGTCTCAGCATTGTTAGAGGCCAAGAAAGCTCAGTATTTATCAACATCTAGTGAACTAGCAGCATCAAAATTGTTGAATCCAGTAGCGCTGTTTCGCTCCGCTTCTTCACGCTCATCCCCatcaagatttttaatgaaTTCTTCAGGTACTAGGGATGAGGTTTACGAAGGCACCGATGATCCACTAGAGGAACATTGTTTGTTTTCTGTTAGTCATCAGTCGACATTAGACAGATTATATGCTTGGGAGAAGAAGCTCTACGAGGAAGTCAAGTCTGGAGCACGTGTTCGAATTACATATGAGAAAAAATGTCAGCAACTCAGGAATCATGATATAAATGGAGAGGAACCCTCTTCTGTTGATAAAACAAGAGCAACCATTAGAGATCTACATACCCAGATAACAGTTTCAATACACTCAGTTGAAGCTATTTCCAGGAGAATTGAAACTCTAAGAGATGAAGAATTGCATCCCCAGCTTCTTGAATTGGCGCAAGGGCTGGCCAAGATGTGGAAAGTGATGGCAGAATGTCATCAGACACAGAAGAGAACCTTAGATGAAGCCAAGATTCTTCTAGTTGACACTGATGCCAGAAAACAGTGTGCCACATCACTAACTGATCCACAAAGGCTTGCTCGTTCTGCCTCCAATCTTGAAACTGAATTGAGGCATTGGCGAAACACCTTTGAGTCATGGATCGCTTCTCAGAGATCCTATATTCATGCTCTAACTGGCTGGCTTCTGAGATGTGTGAGATGTGAGCCTGATCCATCAAAGCTAGCATGCTCTCCTCGTAGGTCCAGTGGCACTCATCCATTATTTGGACTTTGTGTTCAGTGGTCAAGGCGTCTAGACGCCCTCCAAGAAACAGCAGTGCTTGATGGCATAGACTTTTTTGCAGCCGGCATAGGGTACCTCTATTCACAACAGTTAAGAGAAGAGACTCGGCAAAATCCAGTTGGATCAAAAGAACATAATGAGAATATTGAAATGGTGGAAGTTGGTCGGGTTGGAGAGGAAATGAATACTGAGAAATTGGCTGAAGTTGCTATTAAGGTGCTTTGTGCTGGCATGTCAACTGCTATGAGCTCAATGGCAGAGTTTGCTGTTGATTATGCTGAGGGATACAATGAACTTGCTAAGAAATGGGAGAATGTGAACTTGCAGCAGATTTCTTGTGGGGCTGGAACATAG 2247 0.4281 MGCSQSRLEDEEAVKLCKDRKRFIKQAVEQRTQFATGHVAYIRSLKRVSAALRDYFEGSDPCEMPLDSFITTPFTPVKKTSPSFIPISSKSFTPTTIEFAPKTTLKVNYLRPGGNPAISVEERPQSPEMVRVEMYSPMHQFGIDGFFPMQSSPMNPSIFAYSPNNRPNIPPPSPQSSQWDSFWNPFSSLDYYGYPTRSSLDQTGMDDETRGLRQVREEEGIPDLEEDETEQEDFVEKRNVAEGRAKTDVNPSKEEVTVEDVDEHKEDEEEKGTEAETGTANEVTESQANGGECFQVSKAQTTGQEMATGNQEAKEETPDFTVYVDRRPTSMAEVIRDLEAQFTIICNAASGVSALLEAKKAQYLSTSSELAASKLLNPVALFRSASSRSSPSRFLMNSSGTRDEVYEGTDDPLEEHCLFSVSHQSTLDRLYAWEKKLYEEVKSGARVRITYEKKCQQLRNHDINGEEPSSVDKTRATIRDLHTQITVSIHSVEAISRRIETLRDEELHPQLLELAQGLAKMWKVMAECHQTQKRTLDEAKILLVDTDARKQCATSLTDPQRLARSASNLETELRHWRNTFESWIASQRSYIHALTGWLLRCVRCEPDPSKLACSPRRSSGTHPLFGLCVQWSRRLDALQETAVLDGIDFFAAGIGYLYSQQLREETRQNPVGSKEHNENIEMVEVGRVGEEMNTEKLAEVAIKVLCAGMSTAMSSMAEFAVDYAEGYNELAKKWENVNLQQISCGAGT 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0712 748 MobiDBLite consensus disorder prediction 247 284 - -
Ssu6g0712 748 PANTHER DUF630 FAMILY PROTEIN 1 740 - -
Ssu6g0712 748 MobiDBLite consensus disorder prediction 213 234 - -
Ssu6g0712 748 PANTHER UNCHARACTERIZED 1 740 - -
Ssu6g0712 748 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Ssu6g0712 748 Pfam Protein of unknown function (DUF632) 331 654 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0712 Ssu-Chr6 11244101 11247915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0712 1 684 Acyl Lipid Metabolism Gene Families AT2G27090 28.205 8.27e-68 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0712 - - gmx:100818631 1233.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0712 6 11244101 11247915 Ssu6g0712 6 11244101 11247915 ECH
Ssu6g0712 6 11244101 11247915 Ssu1g1470 1 33958458 34113827 PCT