Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0709 ATGGGGGCTTGTTTTTCTTGTGACTCCTCCTCCCCATTCAAGAACGTCCGTGTGGTTCATATCAATGGTTATGTAGAGGATTTTGAGCAACCCATTTCAGCGAGGCAAGTTATTGGATACCCCCCAAAACACTTTGTTTGCACTTCCACTCAGCTTCTTTCCTCTTTCTCATCAAAATCATTGAATGGAGACACCCACCTCCAACCTGGGCAAGTGTATTTCATGCTACCATACTCAGTACTCCAACCTGATGTTTCTCCTGTGGACCTGGCTGGCCTTTCGAAGAGACTCACCGCAATAGCCAAAACAAGTCCTTTGTCAAGCCAAACCCAAACGGTCTGGATTTCACCCTCGAGGAGTCCTTGTAGAGTTGGGGTGGCAGGGCAATATGGTGTGAGTATGATGAATGGAGGACGAAGCCCTTGTAGAGTGCAAACTTGGAAACCTATCTTGGACACCATAACAGAGAAGCCGTTCCATAGAAGAAGTGAATCTGATTTGCAAGAAAGTTGTTGA 516 0.4632 MGACFSCDSSSPFKNVRVVHINGYVEDFEQPISARQVIGYPPKHFVCTSTQLLSSFSSKSLNGDTHLQPGQVYFMLPYSVLQPDVSPVDLAGLSKRLTAIAKTSPLSSQTQTVWISPSRSPCRVGVAGQYGVSMMNGGRSPCRVQTWKPILDTITEKPFHRRSESDLQESC 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0709 171 PANTHER OS06G0700300 PROTEIN 1 167 - -
Ssu6g0709 171 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 167 - -
Ssu6g0709 171 Pfam PADRE domain 1 156 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0709 Ssu-Chr6 11085082 11085597 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0709 - - gmx:100785670 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0709 6 11085082 11085597 Ssu6g0709 6 11085082 11085597 ECH
Ssu6g0709 6 11085082 11085597 Ssu1g1483 1 34642186 34642734 PCT