Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0686 ATGGTTAATGTTCCATATTCTTCTAGTTCTTCAGGTTTTCATTCAGATGGTGTTCTTGTGCAAAATGATTGTAGCAGTTCAAGTTTGTCTTTAAGGGAGGTTTTGCTTGCTTATGTAACAAAAGGAAATGATATCCTAGTTTTGGGTTCTTTGAGTGTGCTTGCAACTCTGCTGCAAACTAAAGAACTTGATGAATCAATGCTAGATGGGCTTGGAATTCTTCCACAACGAAAACAACACAAGAAATTGTTATTGCAAGCTTTAGTTGGTGAGGGTTCGGGTGAAGAGCAGCTTTTTTCATCCAAAAGTAGCTTGAGTAAGGATGTCATTGGCAATGATATCAATGTCTATCATCAAAAGATCAAGGAGCAGTATGGAGTATCTTTTCTGCCTTCTGATGTGGGAATAAGCTCTCATGTACATAGATTTCAGGTGATTGATGCATTAGTGAGCCTCTGTTGCCGCTCTAATATATCTGCAGATATACTATGGGATGGTGGTTGGCTTTTGCGCCAGTTGCTTCCTTACAGTGAGTCAGAATTCAACAGCCATCACCTTGAGCTACTGAAAGTTTCTTACAAGAATTATGCTTCTGCTTTTGAAGAGGAGGTTAGAGGTATCTGGTCTGACTTCCTTATTTCTGTTCTCTGTGATGAATGGAGAAAGTGCAAAAGAGCAATGGAGTCATCGTCTCCTCGGAAAGAACTGAATTGCATACTTTTGCTACCACGAAAGTTTTCTTCAGAAGAGGGGTCATCTTTTGCTGCTGGAGAAAGAATGCACGAGTTGGTGAAGGTATTTGTGCTACTGCACCAACTTCAAATATTCACTCTTGGTAGAGCTTTATCTGAGCAACCCACAATTTACCCTCCTGGTGATCTCCCCGCAAATTGCCATGCCCGGGGTTCTGGGTTTGATGTGTCAGACCCAAAGGCAGGCACTGAAGTCAGCCTTGGCAATGCCGTGCCTTGTAGAATTGCTTTCGAGAGGGGCAAAGAGTGCCATTTTTGCTTTCTAGCAATCTCTTTAGGAATATCTGGATGGCTTATTCTTGCAGAAGAATTGCCACTAAAGAAGTCCTATGGAGTGGTTCGGGCTGTGGCACCTTTGGCTGGGTGCAATCCCGGGATTGATGATAAACATGCAACGTGGTTACACTTGCGGATTCGGTCATCCTCTTTACCCTTTCTAGATCCTGTACAATTCGAAGACTATGggaaaaagaagacaaaagctTCAATAGATGGCAGCTGGACGTTAGCGTTCAGAGATGAGGAGACTTGCAAGTCTGCTTTTCTCATGATTGTTGAAGAGATCAATTTTCTGAGTGACGAGGTTCATAGAAGACTAAAACCTTTGCTTAACCTTGAAACTGCAATAGATTTATCAAGAGCTTCTGTATGTGATCCAGAGGATTCCTCTTCGTATAGAACACATCCCAAGTAA 1446 0.4163 MVNVPYSSSSSGFHSDGVLVQNDCSSSSLSLREVLLAYVTKGNDILVLGSLSVLATLLQTKELDESMLDGLGILPQRKQHKKLLLQALVGEGSGEEQLFSSKSSLSKDVIGNDINVYHQKIKEQYGVSFLPSDVGISSHVHRFQVIDALVSLCCRSNISADILWDGGWLLRQLLPYSESEFNSHHLELLKVSYKNYASAFEEEVRGIWSDFLISVLCDEWRKCKRAMESSSPRKELNCILLLPRKFSSEEGSSFAAGERMHELVKVFVLLHQLQIFTLGRALSEQPTIYPPGDLPANCHARGSGFDVSDPKAGTEVSLGNAVPCRIAFERGKECHFCFLAISLGISGWLILAEELPLKKSYGVVRAVAPLAGCNPGIDDKHATWLHLRIRSSSLPFLDPVQFEDYGKKKTKASIDGSWTLAFRDEETCKSAFLMIVEEINFLSDEVHRRLKPLLNLETAIDLSRASVCDPEDSSSYRTHPK 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0686 481 PANTHER PROTEIN TRANSPARENT TESTA 9 2 465 - -
Ssu6g0686 481 PANTHER UNCHARACTERIZED 2 465 IPR039272 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0686 Ssu-Chr6 10728899 10738978 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0686 K19513 - gmx:100786267 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0686 6 10728899 10738978 Ssu1g1503 1 35246525 35261473 PCT