Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0659 atggtggtgaagAAGCCACGTATTGTTATAATTGGAGCAGGAATGGCAGGCCTCACTGCTGCCAACAAGCTTCACAGTGTCACTGCCTCCAAAGACTTGTTTGAACTGTGTGTTGTGGAAGGTGGAAACAGGATTGGTGGGAGAATCAACACATCAGAGTTTGGTGGTGACCGGATTGAGATGGGTGCTACTTGGATCCATGGAATTGGAGGCAGCCCAATTCACAAAATAGCCAAACAAATCCATGCACTTGAGTCTGAGCAGCCTTGGGAGTGCATGGATGCGAATGAGAACAACTCCTGTGAGGCCACCACAATTGCTGAAGGTGGCTTTGTGCTAAACCCTTCCTTTGTTCACCCCATCACCAAGCTTTTCAACAATCTCATGGATCATGCTCGGGGAAGATgtcgacgacgacgacgacgacaaCGACTACCAACTGTGACTGTGGAAACCTTAGTGTTGGCTCTTTTCTTAGACAAGGCCTTGATGCTTATTGGGGCTCATCAAAAGAGGAAGGGGAGCTCAAAGGGTTGGGAAAATGGAGCAGGAAAAAGTGAATACCAAATCTTTCCAGGTAAAGAAATCACAATTGCTAAAGGGTACTTGAGCATAATTGAATCTTTAGCATCTGTGCTGCCACCTGGTTTAGTTCAGTTGGGTAGAAAAGTCACGAGAATTGAATGGCAGCCCGAGAGACATGAGCCGATGAATATGGAAAATGGAACATGTTCTAGGCCTGTGAGGCTACATTTCTGTGATGGCTCTAGTATGTCTGCGGATCATGTCATTGTCACAGTTTCACTTGGAGTATTAAAGGCTGCTATTCGTGATGATCATTCAGGTATGTTAATGTTCCATCCCCCTTTACCCACTTTCAAGGCCGAGGCTATTTCAAGGCTTGGTTTTGGTGTTGTTAACAAGTTGTTTATGCAATTGAGTCCTCCTCCTCCAATAAGAGATGAACACTCCAAAGGGTTTCCCTTCTTGCAAATGGTTTTTCATTCACCTCAGTCTGAGTTAAAGCACAAGAAAATACCCTGGTGGATGAGGAGGACGGCTACCCTTTGTCCCATCTACCACAATTCTAGTGTCCTCCTAGCTTGGTTTGCTGGGGATGAAGCACTGGCACTAGAGTCACTCAAAGATGAAGAGATTATTAAAGGGGTTTCAGTTACACTTTCAAGCTTCCTATCGCATTCACTTGAGTTTTGCAATGGGAATGTGAATTCTGAGAAGTACTCTCACGAATATAAGGTGAAATTCAGTAAAGTCTTGAAGAGCCAATGGGGAACAGATCCATTATTTTTAGGCTCATACAGTCATGTAGCAGTTGGATCAAGTGGTAATGATTTAGATACAATGGCAGAGCCATTGCCAAAAAGTAGCAGTAGCCACCCTTCTGCTTCACCACCGCTTCAAATTTTGTTTGCAGGGGAAGCAACCCACAGAACCCATTATTCTACAACTCATGGAGCTTACTTCAGTGGTCTTAGAGAAGCCAATAGGCTTCTTCAACACTATTCACTGTattaa 1536 0.4316 MVVKKPRIVIIGAGMAGLTAANKLHSVTASKDLFELCVVEGGNRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAKQIHALESEQPWECMDANENNSCEATTIAEGGFVLNPSFVHPITKLFNNLMDHARGRCRRRRRRQRLPTVTVETLVLALFLDKALMLIGAHQKRKGSSKGWENGAGKSEYQIFPGKEITIAKGYLSIIESLASVLPPGLVQLGRKVTRIEWQPERHEPMNMENGTCSRPVRLHFCDGSSMSADHVIVTVSLGVLKAAIRDDHSGMLMFHPPLPTFKAEAISRLGFGVVNKLFMQLSPPPPIRDEHSKGFPFLQMVFHSPQSELKHKKIPWWMRRTATLCPIYHNSSVLLAWFAGDEALALESLKDEEIIKGVSVTLSSFLSHSLEFCNGNVNSEKYSHEYKVKFSKVLKSQWGTDPLFLGSYSHVAVGSSGNDLDTMAEPLPKSSSSHPSASPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYSLY 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0659 511 Gene3D - 8 503 IPR036188 -
Ssu6g0659 511 SUPERFAMILY FAD-linked reductases, C-terminal domain 302 442 - -
Ssu6g0659 511 PANTHER FLAVIN MONOAMINE OXIDASE 1 163 - -
Ssu6g0659 511 PANTHER FLAVIN MONOAMINE OXIDASE 185 509 - -
Ssu6g0659 511 Pfam Flavin containing amine oxidoreductase 15 135 IPR002937 GO:0016491
Ssu6g0659 511 Pfam Flavin containing amine oxidoreductase 186 505 IPR002937 GO:0016491
Ssu6g0659 511 SUPERFAMILY FAD/NAD(P)-binding domain 3 508 IPR036188 -
Ssu6g0659 511 Gene3D - 97 448 - -
Ssu6g0659 511 PANTHER POLYAMINE OXIDASE 5-RELATED 1 163 - -
Ssu6g0659 511 PANTHER POLYAMINE OXIDASE 5-RELATED 185 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0659 Ssu-Chr6 10240788 10242415 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0659 K12259 - gmx:100809633 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0659 6 10240788 10242415 Ssu6g0659 6 10240788 10242415 ECH
Ssu6g0659 6 10240788 10242415 Ssu1g1524 1 35903958 35905676 PCT