Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1524 ATGGTGGTGAAGAAGCCACGGATTGTGATAATTGGAGCAGGAATGGCAGGCCTCACAGCTGCCAACAAGCTCTACACTGCCACTGCCTCAAAGGACTTGTTTGAGCTGTGTGTTGTGGAGGGTGGAAGCAGGATTGGTGGCAGAATCAACACCTCAGAGTTTGGTGGTGACCGTATTGAGATGGGTGCTACTTGGATCCATGGAATTGGAGGCAGCCCAATTCACAAAATTGCTGAAGAAATCCACTCACTCCACTCTAACCAACCTTGGGAGTGCATGGATGGCAACACTGATGAGGCCATCACCATTGCTGAAGGTGGCTTCCAACTCCACCCTTCCATTGTTGACCCCACCACAAAGCTCTTCAACAACCTCATGGATTACTCCCAAGGGAAGCTCACTGAAGCCACTGCAAAAGGGGAACTTGAAACTTATCATAAGCTGGCTGCTCTTGCTGCTAAGGCTACTTCCAACATGTCTGGGAACAACAACCTTAGTGTTGGTTATTTTCTCAGACAAGGCCTTGAGGCTTACCAGGTTTCAAAGGAGCAAGAGGAGGTCAAAGGGTGTGGGAACTGGAGCAGGAAGTTACTTGAGAAAGCAATCTTTACAATGCATGAGAACAACCAGAGGACCTATACTTCAGCTGATGACCTTTTGACACTGGATTATAGTGCTGAAAGTGAGTACAGAATGTTCCCAGGTGAAGAAATCACAATTGCTAAAGGGTACTTGACAATAATTGAGTCCTTAGCTTCTGTGTTGCCACCTGGTTTGGTTCAGTTAGGTAGGAAAGTCACAAGGATTGAGTGGCAGCCTGATGAGAGGAAGGGTGTGGAAAATGGCTGTTGTTCTTCTAGGCCTGTGAAGCTGCATTTTTGTGATGGCTCCGTTCTGTCTGCTGATCATGTCATTGTCACAGTTTCACTGGGAGTGTTAAAAGCTGCTATTCGTGATGATTCAGGTATGTTCTGTCCTCCTCTTCCCCCTTACAAGGCCGAGGCAATTTCAAGGCTTGGTTTTGGGGTTGTTAACAAGTTGTTTATGCAATTGAGTCCAACTCATGGAGGAgggaaacatcaacatcaacatcaacatgAACAGGAACACTCCAACACAGGGTTCCCTTTCCTGCAAATGGTTTTCCATTCACCTCAATCTGAAATGAGGCACAAGAAAATACCCTGGTGGATGAGGAAGACAGCTACCCTTTTCCCCATCTACAACAATTCTAGTGTCCTCTTGTCTTGGTTTGTGGGTGAAGAAGCACTAGCACTTGAGTCACTCAAAGATGAAGAGATCATCAATGGGGTTTCATCCACAGTCTCATGCTTTCTACAGCATTCTCAGTGGCAAAAGTGTTCCAGTTCACATAAATTGTGCAATGGGAATGTGAATTCTGAGGAGAGATCTCACCAAAATGAAGTGAAGTTCAGTAAAGTCTTGAAGAGCAAATGGGGAACTGATCCCTTGTTTTTAGGCTCATACAGTTATGTTGCGGTAGGATCAAGTGGTGATGATTTAGATACAATGGCCGAGCCATTGCCAAAAGATAGCAGTTGTCAGCCTTCTGCTTCATCTCCActtcaaattttgtttgctGGGGAAGCAACTCACAGAACTCATTATTCCACAACTCATGGAGCTTACTTCAGTGGTCTTAGGGAAGCCAATAGGCTTCTTCAACATTATCATTGTGTTGGGATTTATAacaactag 1719 0.441 MVVKKPRIVIIGAGMAGLTAANKLYTATASKDLFELCVVEGGSRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAEEIHSLHSNQPWECMDGNTDEAITIAEGGFQLHPSIVDPTTKLFNNLMDYSQGKLTEATAKGELETYHKLAALAAKATSNMSGNNNLSVGYFLRQGLEAYQVSKEQEEVKGCGNWSRKLLEKAIFTMHENNQRTYTSADDLLTLDYSAESEYRMFPGEEITIAKGYLTIIESLASVLPPGLVQLGRKVTRIEWQPDERKGVENGCCSSRPVKLHFCDGSVLSADHVIVTVSLGVLKAAIRDDSGMFCPPLPPYKAEAISRLGFGVVNKLFMQLSPTHGGGKHQHQHQHEQEHSNTGFPFLQMVFHSPQSEMRHKKIPWWMRKTATLFPIYNNSSVLLSWFVGEEALALESLKDEEIINGVSSTVSCFLQHSQWQKCSSSHKLCNGNVNSEERSHQNEVKFSKVLKSKWGTDPLFLGSYSYVAVGSSGDDLDTMAEPLPKDSSCQPSASSPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCVGIYNN 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1524 572 PANTHER POLYAMINE OXIDASE 5-RELATED 1 568 - -
Ssu1g1524 572 SUPERFAMILY FAD/NAD(P)-binding domain 3 564 IPR036188 -
Ssu1g1524 572 Gene3D - 8 338 IPR036188 -
Ssu1g1524 572 SUPERFAMILY FAD-linked reductases, C-terminal domain 340 498 - -
Ssu1g1524 572 PANTHER FLAVIN MONOAMINE OXIDASE 1 568 - -
Ssu1g1524 572 Gene3D - 94 450 - -
Ssu1g1524 572 Pfam Flavin containing amine oxidoreductase 15 561 IPR002937 GO:0016491
Ssu1g1524 572 Gene3D - 505 559 IPR036188 -
Ssu1g1524 572 Gene3D - 477 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1524 Ssu-Chr1 35903958 35905676 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1524 K12259 - gmx:100783032 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1524 1 35903958 35905676 Ssu1g1524 1 35903958 35905676 ECH
Ssu6g0659 6 10240788 10242415 Ssu1g1524 1 35903958 35905676 PCT