Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0638 ATGGCGAACGAGCCTGAAAGTATAGCCACCGGTCTCAAACAGTCTTCCGTGCGGCACAGGCCTAGCGCCGCCTCCGCTGGTGACCTCTTCAATTCGTCGCTGACGACAGAGAGTTCCGGTGAAGAGTTGGTGAAGGATTCCAGTTCCGACGACTCCATCAGCAGCGACGCCGCTAATCCACAACCACAAGAAAAGCAAGAGACCGATATCTCCGTCCTCAAATTTGCGTACCGTCCTTCCGTCCCCGCTCACCGCAGAGTGAAGGAAAGTCCGCTCAGCTCCGACAACATTTTCCGTCAGCTGCAGAGTCACGCGGGCCTCTTCAACCTCTGTATAGTAGTGCTTGTTGCAGTGAATAGCAGACTCATCATCGAGAATTTAATGAAGtATGGTTGGTTGATCAAGTCTGGCTTTTGGTTTAGTTCATTGAGAGACTGGCCCCTCTTCATGTGTTGTCTTTCTCTTGTGGTATTTCCTTTTACTGCCTTTATAGTGGAGAAGTTGGCACAACGAAAGTGTATACCTGAACCAGTTGTTGTTCTACTTCATATAATCAATACCTCAGCTGCACTTTTTTATCCCATTTTAGTAATTCTCAGGTGTGATTCTGCTTTTCTATCAGGGGTCACATTAATGCTATTTGCTTGCATTGTATGGTTAAAATTGGTGTCTTATGCACATACAAACTACGATATGAGAGCACTTATCAAATCGGTTGAAAAGGGAGAAGCACTGCCCAATACTCTGAATATGGACTATCCTTACAGTGTGAGCTTCAAGAGCTTGGCATACTTCATGGTTGCTCCTACATTATGTTACCAGCCAAGCTATCCTCGCACACCTTATATTCGAAAGGGTTGGGTGATTCGCCAACTTGTCAAGCTGATAATATTTACAGGAGTTATGGGATTTATAATAGAACAATACATTAATCCTATTGTACAAAATTCACAGCATCCTTTCAAGGGAAACCTTCTCTACGCCATCGAGAGAGTTCTGAAGCTTTCTGTTCCAAATTTATATGTGTGGCTCTGCATGTTCTATTGCTTTTTCCACCTTTGGTTAAATATACTCGCAGAGCTTCTTCGATTTGGTGATCGTGAGTTCTACAAGGATTGGTGGAATGCCAAAACAGTTGAAGATTATTGGAGGATGTGGAATATGCCTGTTCACAAATGGATGATCCGCCACCTATATTTTCCATGTTTAAGACATGGCATACCAAAGGCCATTGCTTTTTTAATTGTCTTCCTGGTTTCTGCTTTATTCCATGAGCTGTGCATTGCTGTTCCTTGCCACATATTCAAGCTGTGGGCGTTCGGGGGAATTATGTTTCAGGTAAAATCAAATTACCGCATTATACTACTGTTTGTGCAACTAaagtattttaaagtaaaattaacacAGATTTTCCAAGAAACCAAACTTCTCCCCTCTTCCCCCAAGGCTAgcccagaatttttttttcccctgttCTTTTATGGCCAAACGAAAGGAAGTATTCTCTGGAGTAATGAATTTGTGCCGTGA 1530 0.4209 MANEPESIATGLKQSSVRHRPSAASAGDLFNSSLTTESSGEELVKDSSSDDSISSDAANPQPQEKQETDISVLKFAYRPSVPAHRRVKESPLSSDNIFRQLQSHAGLFNLCIVVLVAVNSRLIIENLMKYGWLIKSGFWFSSLRDWPLFMCCLSLVVFPFTAFIVEKLAQRKCIPEPVVVLLHIINTSAALFYPILVILRCDSAFLSGVTLMLFACIVWLKLVSYAHTNYDMRALIKSVEKGEALPNTLNMDYPYSVSFKSLAYFMVAPTLCYQPSYPRTPYIRKGWVIRQLVKLIIFTGVMGFIIEQYINPIVQNSQHPFKGNLLYAIERVLKLSVPNLYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNAKTVEDYWRMWNMPVHKWMIRHLYFPCLRHGIPKAIAFLIVFLVSALFHELCIAVPCHIFKLWAFGGIMFQVKSNYRIILLFVQLKYFKVKLTQIFQETKLLPSSPKASPEFFFPLFFYGQTKGSILWSNEFVP 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0638 509 PIRSF Oat_ACAT_DAG_ARE 7 464 IPR014371 GO:0008374
Ssu6g0638 509 MobiDBLite consensus disorder prediction 1 68 - -
Ssu6g0638 509 Pfam MBOAT, membrane-bound O-acyltransferase family 258 448 IPR004299 -
Ssu6g0638 509 PIRSF Oat_dag 7 461 IPR027251 GO:0004144|GO:0019432
Ssu6g0638 509 MobiDBLite consensus disorder prediction 8 42 - -
Ssu6g0638 509 MobiDBLite consensus disorder prediction 50 68 - -
Ssu6g0638 509 PANTHER DIACYLGLYCEROL O-ACYLTRANSFERASE 1C 10 462 - -
Ssu6g0638 509 PANTHER STEROL O-ACYLTRANSFERASE 10 462 IPR014371 GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0638 Ssu-Chr6 9913544 9920833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0638 75 447 Lipid Metabolism Gene Families AT2G19450 76.533 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0638 K11155 - gmx:548005 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0638 6 9913544 9920833 Ssu6g0638 6 9913544 9920833 ECH
Ssu6g0638 6 9913544 9920833 Ssu1g1546 1 36704810 36715582 PCT