Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0629 ATGGCAACATCTAGCAAGTTTGATCCATCTTCCAGTAGCCCAGATAGACCATTGTACTCTGGGCAACGTGGATCCCACATAGCTGCTTCATTAGATAGATCAGGTAGCTTCCGGGAAAGCATGGAAAATCCAATTCTGTCTTCTCTTCCTAACATGTTAAGAAGCAGTTCTCCAGCAACGCATGGGGATGTGGAGAGGTTCTTCAATTATGTGCGTTTTGTTCCAAAGTTGTTAACGCTAGAGCATAAATCTAATCGTCAAATGGATTTTAAGCGACATTTTAATGCTGCTCTTGGAATTTCACCTGATGAATCTCCATCTAGTTCTTCAAAAGGCAAGCTACTGCCATCACCAGTACCAGAAGATATGAAACGACTCAAGGAAGTTTTGGGTGCAAACATTGTGAAGGCAAGGGAACGTGTGAAAATGTTTAGTGAGGCTTTACCTGTATTCCATGAAGTTTTCCCAGCTCTAACTTCAAAGAAAAGATCACGAGCTGAAGGTTTTTCTAATGACCGTTCTAATGCCATATTAAATGATCGGCCAGTCTTGGGGCCAAGCTTAGGTAAGGTTGGAGTTCAAGGTCATCCTGTCACAGGTGGTTTTGAGCTTGAGCAGCAAAAATCAGAAGAACGTACCAAAAATGTTGTTCCAAACAAGCGCACTCGAACTTCTATGGTTGATGTAAGGATGGATGTGCGGACTAATTCTCTTGTCAGGCCATCAGGGACAGTTGACAGAGATAAGGAAAAGCTTCGGATTTCCAACAATGGTGTAGTTCAGAGTGAAGAACGAACCTTACCTATCGGAGGTGATGGTTGGGAAAAGTCTAAAATGAAGAAGAAGCGTTCCTGCATCAAACTAGATGGTTCTCCAAGTACAACATTGACTAAACCTGTTAATACCTTCCAAGAAACTAAGCAGGGAATGCAACAAAGACTTGTTACTGATTCACGGTCAAAATTGAGTAATGATTCTCATTCTTTCAGgacgGGAGTTTCTAATGGAACTGTTGCAGGTGGAAAATCAGATGGTATCTCTCAACAAACTGGGTTGGGCATACGAGCCTCTACCCCTAGAAACAACCAAGATAATAATTCCCTTGTCAATGATAGGAGGGGTCGTCTTGTTAGTTCAGACAAGGAAAGGGGGAATTTCAGAGCTGCAAACAAGGCAACTGCACGTGATGAATTTAATTCAGCTAGCCCTACCTCAAGTGCAAAAATGAACACTGCTATTCGGGCTCCACGGTCAGGTTCTGGAGTTGCCCCCAAGTTGTCACCAGTTGTCCATAGAGCAGCTGTTCCTAATGATTGGGAACTGCCTCATTGTGCTACAAAGCCCCCTGCTGCTGGTGGTACTAGCAATCGTAAACGTGTGACGTCAGCACGGTCTTCTTCCCCACCTGTTGTCCCCTGGCAGAGACCGCAAAAGAGCTCTCGCACTGCTAGAAGAACAAATTTCATGCCCATTGTTCCAAATAGTGATGAAACTCCAGCTTCGGATACCGCCTCTGATGTGGCTGGTAATGATCTTGGGTTAGGATTTGCCAGACACGTGGCTGGCAGTTCTCCTcagcaaattaaattaaaaggtgATCCTTCATCTTCAGCTGCCTTATCTGAAAGTGAAGAGTCAGGGGTGGCTGAGGttaaaccaaaagaaaagggTAGGAAACCAGAAGAGATAGATCTGAAAGCTGGACAAAATGTTCAAAAGGTGTCTAACGTGGTATTGTCAACAAGAAAGAATAAGCTTGTTTCAGGGGAAGAACATGGAGATGGTGTTCGGAGGCAAGGGAGGACAGGACGCAGTCTTACTGCCACAAGATCACTGATGCCAATGACATCTGAGAAGCTTGGGAATATAGGAACTGCAAAACAACTTAGAAGTGCCAGACTAGGATCTGATAAGAATGAAAGCAAGGCAGGTCGTCCACCATCCAGGAAACTCTCTGATCGTAAGGCCTATGCACGTCAAAAGCCTGCTATTAATGCAGCGGCAGATTTTTTTGTTGGGTCAGAAGATGGACATGGAGAGCTGCTGGCTGCTGTAAAGGGTGTTATCAACTCTGCTCATGCTTTTTCCAGCCCCTTCTGGAGGCAGATGGAGCCTTTCTTCAGGTTGATAACTGAGGAGGATATCACTTACTGGAAGCAAAAGGTAAATCTTGAATCAAGCACATTGACGCCAACTCCTGTTCCTCCAAATATAGATGGTTGTGAAACCGTTGTTAATGGATATGGGTTGATGGGCTGTGAAAGAGATGCTGGATCTGATGCTCAATGGAATGCTGGAATTACTGCAGAACAGTTACAACTATCTAAGAGAGATCATAATGTGATTCCTCTCTGTCAAAGGCTTATAGCTGCTTTAATCTCAGAGGAGGAGTGTAGTGGTGGAAGTGAACACTTCAAGTTTGATGCATATGATACTGAATTTGAGCCTGATGGGGAATCAGAATTGAGTGGTTTGGATCACCACTCAGGAACAAATTTTCAGTTTGCTTGTCATTCTGCTTATAATGGTTATAGGATTATGGACAAGCCAGAACATGATGAAACTGAAAGTGATATAGTTGCTTTTCCTCCAACTGGGTTGAATCCAAGCTTTGGTAAATCCGTAAATGGTTTTCTTCACGATAAAGCATTAATGTCTAGCTTCACCTGTTCAGAGTTGCAATATGATAGCTTGGATATAAATGATAAGCTTCTCTTGGAGCTTAAAAGTATTGGAATTGCCCCAGCACCAGTGccTGATATGTTGCAAACAGATGATGAAGGAATATTGGAGGATATTATTAGGTTGGAGGAGCTTTACCAAGGACAGATTTTCAAGAAGAAAAGCTTGCTGGATGGATTGTTCAAATCTGTGTCGGTGGATAAAGATCTTCAAGAAAAGGATTTTGAACAACGTGCTCTAGATAAACTTGTTGTGATGGCTTATGAGAAATACATGGCTTGTTGGGGTAGTCCCTCTGGTGGGAAAAATACAAGCAACAAAATGGCCAAGCAAGCTGCATTGGGATTTGTCAAACGGACATTGGAACGATGCCATCAATTTGAAGATACTGGCAAGAGCTGCTTCAGTGAGCCTTCATTCAAGGATATGTTCCTTGCTGAATCCTCAAAACCATATGCTTCTTCCCTTCCTCTGGAAGCAAGAACAGCTTCCATGGGTTCACAGCAGAGCCCATCACAGTTTAGTCAGAATATGGATAATCATGATCTCAATTCATCAGATATGCTTCCTGCTTTAAATCATTCATCTGAACAAACTAGTGGGAAGGAAGATCTCTGGTCAAACAGAGTGAAGAAGAGGGAATTGTCCCTTGATGATGTTGGTGGTACTCCAGGTATTTCTAGTGCTCCAGGCATCGGAAGTTCTGTAACAAGCAGTGCAAAAGGAAAGAGAAGTGAGAGAGACAGAGACGGAAAGGGGCACAGCAGGGAGGTACTATCCAGAAATGGAACTACTAAAGTTGGTAGGCCAGCATCGTCCAGTGCTAAGGGAGATAGAAAATCCAAAACAAAGCCTAAGCAGAAAGCAACTCAGCATTCTGTTTCTGTGAATGGCCTCCTTGGGAAGCTATCAGAGCAACCAAAACCAGCATTACCTTCTGTTCCAAAGTCTAATGAAATGCCTACAAATAGCAATGCAAAGGAAAAGGACGAGTTTGGCTTGGGTGGATTGGATGACCATGAGCCTATTGATTTGTCCAATCTGCAGCTACCTGGAATGGATGTACTAGGTGTTGGTGATGACCAAGGTCATGATCTTGGTTCGTGGTTGAATATTGATGATGATGGATTACAAGATCATGATGACTTTATGGGTGGCCTTGAAATTCCAATGGATGATCTCTCGGACTTGAATATGATGGTTTGA 3888 0.4282 MATSSKFDPSSSSPDRPLYSGQRGSHIAASLDRSGSFRESMENPILSSLPNMLRSSSPATHGDVERFFNYVRFVPKLLTLEHKSNRQMDFKRHFNAALGISPDESPSSSSKGKLLPSPVPEDMKRLKEVLGANIVKARERVKMFSEALPVFHEVFPALTSKKRSRAEGFSNDRSNAILNDRPVLGPSLGKVGVQGHPVTGGFELEQQKSEERTKNVVPNKRTRTSMVDVRMDVRTNSLVRPSGTVDRDKEKLRISNNGVVQSEERTLPIGGDGWEKSKMKKKRSCIKLDGSPSTTLTKPVNTFQETKQGMQQRLVTDSRSKLSNDSHSFRTGVSNGTVAGGKSDGISQQTGLGIRASTPRNNQDNNSLVNDRRGRLVSSDKERGNFRAANKATARDEFNSASPTSSAKMNTAIRAPRSGSGVAPKLSPVVHRAAVPNDWELPHCATKPPAAGGTSNRKRVTSARSSSPPVVPWQRPQKSSRTARRTNFMPIVPNSDETPASDTASDVAGNDLGLGFARHVAGSSPQQIKLKGDPSSSAALSESEESGVAEVKPKEKGRKPEEIDLKAGQNVQKVSNVVLSTRKNKLVSGEEHGDGVRRQGRTGRSLTATRSLMPMTSEKLGNIGTAKQLRSARLGSDKNESKAGRPPSRKLSDRKAYARQKPAINAAADFFVGSEDGHGELLAAVKGVINSAHAFSSPFWRQMEPFFRLITEEDITYWKQKVNLESSTLTPTPVPPNIDGCETVVNGYGLMGCERDAGSDAQWNAGITAEQLQLSKRDHNVIPLCQRLIAALISEEECSGGSEHFKFDAYDTEFEPDGESELSGLDHHSGTNFQFACHSAYNGYRIMDKPEHDETESDIVAFPPTGLNPSFGKSVNGFLHDKALMSSFTCSELQYDSLDINDKLLLELKSIGIAPAPVPDMLQTDDEGILEDIIRLEELYQGQIFKKKSLLDGLFKSVSVDKDLQEKDFEQRALDKLVVMAYEKYMACWGSPSGGKNTSNKMAKQAALGFVKRTLERCHQFEDTGKSCFSEPSFKDMFLAESSKPYASSLPLEARTASMGSQQSPSQFSQNMDNHDLNSSDMLPALNHSSEQTSGKEDLWSNRVKKRELSLDDVGGTPGISSAPGIGSSVTSSAKGKRSERDRDGKGHSREVLSRNGTTKVGRPASSSAKGDRKSKTKPKQKATQHSVSVNGLLGKLSEQPKPALPSVPKSNEMPTNSNAKEKDEFGLGGLDDHEPIDLSNLQLPGMDVLGVGDDQGHDLGSWLNIDDDGLQDHDDFMGGLEIPMDDLSDLNMMV 1295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 584 655 - -
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 1098 1112 - -
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 317 424 - -
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 1 25 - -
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 547 566 - -
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 99 119 - -
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 374 390 - -
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 633 655 - -
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 528 543 - -
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 1054 1097 - -
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 522 568 - -
Ssu6g0629 1295 PANTHER OS05G0107300 PROTEIN 1 1295 - -
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 585 599 - -
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 602 624 - -
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 440 507 - -
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 1135 1153 - -
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 395 413 - -
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 1054 1234 - -
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 1 19 - -
Ssu6g0629 1295 PANTHER PLANT/F27B13-30 PROTEIN 1 1295 - -
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 455 505 - -
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 1217 1232 - -
Ssu6g0629 1295 MobiDBLite consensus disorder prediction 317 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0629 Ssu-Chr6 9786777 9796341 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0629 - - gmx:100805358 2319.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0629 6 9786777 9796341 Ssu6g0629 6 9786777 9796341 ECH
Ssu6g0629 6 9786777 9796341 Ssu1g1554 1 36815608 36830064 PCT