Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0625 ATGGATAAAGATGCTAGGGTGGAAGAGACTGTTGATTTGAGAACCAATGTGGAGTTGGTGAGATCAGTCTCTGATAAGTATCATGATCTTTTAAGGCCGTCTGCTCGGAACTATTCAAGAGGACAAGCAATAGATGCAGCTGGCCATGGAAAGGGAAAGTATACCTTAATTAGAGATCCAGAGGACTTCCAAATGGGAATTTATGATAAGCCCCTTCCATTTTATGGATGTGGAATCGGATGGTTCTCatttctttttggatttctATGCCCTCCTATGTGGTTCTATGCTACGATTCTCTATTTTGGAAATCACTATCGGAAGGATCCTAGGGAGCGAGCAGGGCTGGGAGCCTCTGCAATTGCTGCATTAGTGTGCTCTGTAGCGTTGCTGATAATTGCAGTAATTCTTGTGTTAAAATTGCGGTCCCTCTATTTCTAA 441 0.4172 MDKDARVEETVDLRTNVELVRSVSDKYHDLLRPSARNYSRGQAIDAAGHGKGKYTLIRDPEDFQMGIYDKPLPFYGCGIGWFSFLFGFLCPPMWFYATILYFGNHYRKDPRERAGLGASAIAALVCSVALLIIAVILVLKLRSLYF 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0625 146 PANTHER 60S RIBOSOMAL L18A-LIKE PROTEIN 7 136 - -
Ssu6g0625 146 PANTHER BNAC08G12080D PROTEIN 7 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0625 Ssu-Chr6 9741637 9745285 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0625 - - gmx:100795083 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0625 6 9741637 9745285 Ssu6g0625 6 9741637 9745285 ECH
Ssu6g0625 6 9741637 9745285 Ssu1g1559 1 36927311 36930683 PCT