Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1559 ATGGATAAAGGTTGTGGTATGGAAGAAACTTTTGATTTGAGAAATGGTGTGGAATTGGCAACATCAGTCTCTGATAAGCATCTCGACCTTCTAAGACCATCTGCAcgaaattattcaatttttagagGTCAAGCAATGGATGCTGCAGACCATGAAAAGGGAAACTATACCCTAATTAGTGATCCAGAGGATTTCCAAACCGGACTTTATGACAAACCCCTTCCATGTTATGGATGTGGAATTGGATGGTTCTCATTTCTTTTTGGAATTTTATGTCCACCTCTGTGGTACTATGCAACAATCCTCTACTTTGGAAATTACTATCGGAAGGATCCTAGGGAAAGGGCAGGGTTAGGAGCCTCTGCAATCGCTGCATTAATATGCTCAGTAGCATTGCTGATCGTAGGAGCTATTCTTCTGTTACGCTCCCTCTGA 435 0.4046 MDKGCGMEETFDLRNGVELATSVSDKHLDLLRPSARNYSIFRGQAMDAADHEKGNYTLISDPEDFQTGLYDKPLPCYGCGIGWFSFLFGILCPPLWYYATILYFGNYYRKDPRERAGLGASAIAALICSVALLIVGAILLLRSL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1559 144 PANTHER 60S RIBOSOMAL L18A-LIKE PROTEIN 1 140 - -
Ssu1g1559 144 PANTHER - 1 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1559 Ssu-Chr1 36927311 36930683 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1559 - - gmx:100791750 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1559 1 36927311 36930683 Ssu1g1559 1 36927311 36930683 ECH
Ssu6g0625 6 9741637 9745285 Ssu1g1559 1 36927311 36930683 PCT