Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0604 atggagggTGACACATTCTCTGGTCTCGGCAACGGTACCCAGATTGATAGCAAGATCTTGCAGACATTTCATAAAAGCTTTGTTCAAGTCCAGAATATCTTGGATCAGAACCGGGTACTCATCAATGAGATAAACCAGAATCATGAGTCCAAGGTCCCTGACAACCTCAGCAGAAATGTTGGCCTTATTAGGGAGCTCAACAACAACATCAGAAGAGTGGTTGACCTTTATGCGGATCTTTCAAGTTCCTTTACCAAATCCATGGAAGTTTCTTCCGAAGGGGATTCCAGTGGTGCTGTGAAATCTGATGGCAAAGCTGGCCACAAACGACACAGGCCAGCTTAg 345 0.4377 MEGDTFSGLGNGTQIDSKILQTFHKSFVQVQNILDQNRVLINEINQNHESKVPDNLSRNVGLIRELNNNIRRVVDLYADLSSSFTKSMEVSSEGDSSGAVKSDGKAGHKRHRPA 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0604 114 PANTHER PROTEIN ELF4-LIKE 3 1 114 - -
Ssu6g0604 114 PANTHER PROTEIN ELF4-LIKE 4 1 114 IPR040462 GO:0042753
Ssu6g0604 114 Pfam Early Flowering 4 domain 14 95 IPR009741 -
Ssu6g0604 114 MobiDBLite consensus disorder prediction 87 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0604 Ssu-Chr6 9560594 9560938 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0604 - - ccaj:109808760 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0604 6 9560594 9560938 Ssu6g0604 6 9560594 9560938 ECH
Ssu6g0604 6 9560594 9560938 Ssu1g1581 1 37477069 37477401 PCT