Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1581 ATGGAGGGTGACACATTCTCTGGCCTGGGCAATGGTGCCCAGATTGATGCCAAGGTCATGCAGACATTTCAGAAGAGCTTTGTTCAAGTGCAGAACATTTTTGACCAGAACAGGCTACTCATCAATGAGATAAACCAGAATCATGAGTCTAAGGTCCCTGACAACCTCACCAGGAATGTGGGGCTTATTAGGGAGCTCAACAACAATATCAGAAGAGTGTATGACCTATATGCTGATCTCTCAAGTTCCTTTACCAAATCCAGGGAAGTTACTTCAGAGGGGGATTCAAGTGGTGCTGTGAAATCAGGCCACAAGAGACACAGGCCTGTGTAG 333 0.4625 MEGDTFSGLGNGAQIDAKVMQTFQKSFVQVQNIFDQNRLLINEINQNHESKVPDNLTRNVGLIRELNNNIRRVYDLYADLSSSFTKSREVTSEGDSSGAVKSGHKRHRPV 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1581 110 PANTHER PROTEIN ELF4-LIKE 4 1 109 IPR040462 GO:0042753
Ssu1g1581 110 MobiDBLite consensus disorder prediction 83 98 - -
Ssu1g1581 110 PANTHER PROTEIN ELF4-LIKE 3 1 109 - -
Ssu1g1581 110 Pfam Early Flowering 4 domain 14 95 IPR009741 -
Ssu1g1581 110 MobiDBLite consensus disorder prediction 83 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1581 Ssu-Chr1 37477069 37477401 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1581 - - ccaj:109808760 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1581 1 37477069 37477401 Ssu1g1581 1 37477069 37477401 ECH
Ssu6g0604 6 9560594 9560938 Ssu1g1581 1 37477069 37477401 PCT