Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0594 ATGGCGATATTCTCTGAATCGAATCACCATCACAACAGTTCCGATGGGGTCTCGCAGCGAGTCAACAGCCCGCGTTTCTCGGGTCCAATGACTCGCCGCGCCCACTCGTTCAAAcgcaacaccaccaccaccaccacctctcaCGGCGGCGGCGGCGAGGTCGAGCTCCAAATCAACTCGCCGAGATCGGAGGAAGCGTCGGAGGGCGTTCCGGGAGGGAAGCACGGTCACTATCACGTGACCCAGAGAGTGCACGTGAGGGGGCTGCTGAAGAAGCCCCTTGCGTCCATCGTTGAGGATTTGGGGCTGAGGGGAAGGAAGAAATTTGGGCACTGGATGTTCTTGGTGTTCTGTGCGGTGTGCTTGTTCATCGGTGTTCTTAAGATTTGTGCCACCGGCTGGCTTGGATCTGCTATTGAAAGAGCTCAATCCAATAAGGAACTATCTGACTCCATTGCTAGTCTAAATCTAAGGGACCAAAGCTCCCTTGGTTATGCATATAGGGGGGGAGCAAGTGATGTTGAACGAACATTAAAAACAGTAGCAACAGGAGTAGATGGCAGCCATACTGCCATGGCTGAAAATTCAGGGATCTGGTCTAAACCCAACAGTGACAATTTTACCCAGTGCATAGATCTGCCAAGTAATCATAAaaAGCTAGATGCAAAGACCAGTGGCTACATTCTTGTAAATGCAAATGGTGGTCTGAATCAGATGAGATTTGGGATATGTGATATAGTTGCTATTGCTAAGATTATGAAAGCAACACTTGTTCTTCCTTCTCTTGATCACACCTCCTACTGGGCTGATGACAGTGGCTTCAAGGATTTGTTTGACTGGAAGCATTTTATTCATATGCTGAAGGATGATGTCCACATAGTTGAGAAATTACCTCCTGCCTATGCTGGAATTGAGCCTTTCTCAAAAACTCCAATATCTTGGTCCAAGGTTACTTATTATAAGACTGAGGTTCTTCCCCTCCTAAATCAGCACAAAGTGATCTATTTCACTCATACCGATTCCCGGCTTGCTAACAATGGCATTCCAAGTTCCATACAGAAGCTAAGATGCCGTGTAAATTACAGAGCATTGAAATATTCAGCTCCAATTGAAGAATTTGGAAACACATTGGTATCTAGAATGCAACAGAATGGAAATCCCTATCTTGCCCTTCATTTGAGATATGAGAAGGATATGCTTGCATTTACAGGCTGCAGTCACAATTTGACTgcagaagaagatgaagaactGAGACAGATGCGATATGAAGTCAGTCACTGGAAGGAGAAGGAGATTAACGGGACAGAGAGGAGATTGCTTGGAGGTTGTCCATTAACTCCAAGAGAAACTTCCCTATTACTTAGAGCACTGGGTTTTCCATCACACACCAGGATTTATCTAGTAGCCGGAGAAGCATATGGAAAAGGAAGTATGAAATATCTTGAGGACGATTTCCCCAATATTTTCTCTCATTCCTCTCTGTCCTCTGAAGAAGAGTTGAATCCTTTCAAGAATCATCAGAACATGTTGGCTGGTATAGACTATGTTGTTGCCCTTAAGAGTGATGTATTTCTTTACACTTACGATGGAAATATGGCAAAGGCTGTACAAGGTCATAGGCGCTTCGAAAACTTTAAGAAGACCATCAATCCAGACAAGATGAAATTTGTTAAACTTGTTGATCAGTTGGATGAAGGAAAATTTTCATGGAAAAAGTTCAGCTCCAAGGTAAAAAAGCTGCACGGAGACCGAATTGGTGCTCCATATCCAAGGAAGCCAGGAGAATTTCCAAAGCTGGAGGAAAGTTTTTATGCAAATCCTCTGCCAGGATGTATTTGTGAAACAAGATAG 1851 0.4306 MAIFSESNHHHNSSDGVSQRVNSPRFSGPMTRRAHSFKRNTTTTTTSHGGGGEVELQINSPRSEEASEGVPGGKHGHYHVTQRVHVRGLLKKPLASIVEDLGLRGRKKFGHWMFLVFCAVCLFIGVLKICATGWLGSAIERAQSNKELSDSIASLNLRDQSSLGYAYRGGASDVERTLKTVATGVDGSHTAMAENSGIWSKPNSDNFTQCIDLPSNHKKLDAKTSGYILVNANGGLNQMRFGICDIVAIAKIMKATLVLPSLDHTSYWADDSGFKDLFDWKHFIHMLKDDVHIVEKLPPAYAGIEPFSKTPISWSKVTYYKTEVLPLLNQHKVIYFTHTDSRLANNGIPSSIQKLRCRVNYRALKYSAPIEEFGNTLVSRMQQNGNPYLALHLRYEKDMLAFTGCSHNLTAEEDEELRQMRYEVSHWKEKEINGTERRLLGGCPLTPRETSLLLRALGFPSHTRIYLVAGEAYGKGSMKYLEDDFPNIFSHSSLSSEEELNPFKNHQNMLAGIDYVVALKSDVFLYTYDGNMAKAVQGHRRFENFKKTINPDKMKFVKLVDQLDEGKFSWKKFSSKVKKLHGDRIGAPYPRKPGEFPKLEESFYANPLPGCICETR 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0594 616 Pfam GDP-fucose protein O-fucosyltransferase 227 542 IPR019378 -
Ssu6g0594 616 CDD O-FucT_plant 227 548 IPR024709 -
Ssu6g0594 616 MobiDBLite consensus disorder prediction 1 26 - -
Ssu6g0594 616 PANTHER OS02G0726500 PROTEIN-RELATED 113 615 - -
Ssu6g0594 616 PIRSF UCP009360 91 616 IPR024709 -
Ssu6g0594 616 MobiDBLite consensus disorder prediction 34 53 - -
Ssu6g0594 616 MobiDBLite consensus disorder prediction 1 77 - -
Ssu6g0594 616 PANTHER O-FUCOSYLTRANSFERASE 28 113 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0594 Ssu-Chr6 9264452 9269526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0594 198 613 Miscellaneous Gene Families AT2G37980 67.067 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0594 - - gmx:100801100 1150.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0594 6 9264452 9269526 Ssu6g0594 6 9264452 9269526 ECH
Ssu6g0594 6 9264452 9269526 Ssu1g1590 1 37760498 37764665 PCT