Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1590 ATGGCGCACAATAACATGAACCCCACCACCGTGGATGGCGTTCCTCACCGAGTCAACAGCCCGCGTTACTCCGGTTCGATGACTCGTCGAGCTCACTCGTTCAAacgcaacaacaacaacaacaatgagaTTGAACTCCAAATCAACTCACCCAGATCCCCCTCGGTTCCTGCTGAAGGGTCTGTTTTGAAAAGGAAACATCATCATGATGCGAGCCACAAGGAGAGAAAGAACAAGTTTGGGCAATGGGTGTTCTTGCTCTTCTGCGGGGTATGCTTGTTTCTGGGTCTTCTCAAGATTTGTGCCACTGCCTGGTGGTTCCGATCTGCAATACACAGTACACATGAACCCATTCAGGAACTATCTGACTCCATCACTAGTCGAAATCTAATGGATCAAAGCTCCCATGGTTATGCATATAGGGAGGGGGCGAGTGACGTTGAACGAACTCTAAAGATGGTAACTACAGGAGTGATTGATAGCCAGGCTGGCATGGCTGAAGAATCAGGTATCTGGTCTAAACCCAACTATGAGAATTTCACCCAATGTATAGATCTGCCAAGAAATCATAAAAAGCTAGATGCGAAGACCAATGGCTACATTCTTGTAAATGCTAATGGTGGCCTGAATCAAATGAGATTTGGGATATGTGACATGGTTGCTGTTGCTAAGATTATGAAGGCAACACTTGTTCTTCCTTCTCTTGACCACACCTCTTACTGGGGTGATGCAAGTGGCTTCAAGGATTTGTTTGACTGGAAACATTTTATTGAGACACTGAAGGATGATATCCACGTAGTTGAGACATTACCACCTGCCTATGCTGAAATTGGACCTTTCTCAAAAACTCCAATATCTTGGTCTAAGGCCAGTTATTACAAGACTGAGGTTCTTCCCCTCCTAAAGCAGCACATAGTGATCTATTTCACCCATACTGATTCCAGACTTGCTAATAATGGAATTTCAAGTTCAATACAAAAACTAAGATGTCGTGCAAATTATAGAGCATTGAAATATTCAGCTCCAATTGAAGAATttggaaacaaattaatatctAGAATGCGACAGAATGAAAATCCTTATCTTGCGCTTCATTTGAGGTATGAGAAGGATATGCTTGCATTTACTGGCTGCAGTCACAATTTGACTgcagaagaagatgaagaactaCGACAGATGCGATACAAAGTTGGTCACTGGAAGGAGAAGGAGATTAATGGGACTGAGAGGAGATTGATGGGAGGTTGTCCATTAACTCCTAGGGAAACTTCCCTATTGCTTAGAGCACTGGGTTTTCCATCACAAACCAGGATTTATCTGGTAGCTGGGGAAGCATACGGTAGAGGAAGTATGAAATATCTAGAGGATGATTTCCCCAACATTTTCTCTCATTCCTCTCTGTCTTCAGAAGAAGAGTTGAATCCTTTCAAGAATCACCAGAACATGTTAGCTGGTATAGACTATATTGTTGCACTTCAGAGTGATATATTTCTCTATTCTTATGATGGAAATATGGCAAAGGCAGTACAAGGCCATAGGCGCTTTGAAAACTTCAAGAAGACCATGAATCCAGACAAGGTAAATTTTGTTAAACTCGTTGATAAGTTGGATGAAGGAAAATTTTCTTGGAAGAAGTTCAGCTCCAAGGTAAAAAGGCTTCACGAAGACCGAATCGGTGCTCCGAATCCTAGGGAGCGCGGAGAATTTCCTAAGCTAGAGGAAAGTTTTTATGCAAATCCTCTGCCAGGATGTATATGTGGAACAAGATTAGAGTCTACACAGTAG 1785 0.4118 MAHNNMNPTTVDGVPHRVNSPRYSGSMTRRAHSFKRNNNNNNEIELQINSPRSPSVPAEGSVLKRKHHHDASHKERKNKFGQWVFLLFCGVCLFLGLLKICATAWWFRSAIHSTHEPIQELSDSITSRNLMDQSSHGYAYREGASDVERTLKMVTTGVIDSQAGMAEESGIWSKPNYENFTQCIDLPRNHKKLDAKTNGYILVNANGGLNQMRFGICDMVAVAKIMKATLVLPSLDHTSYWGDASGFKDLFDWKHFIETLKDDIHVVETLPPAYAEIGPFSKTPISWSKASYYKTEVLPLLKQHIVIYFTHTDSRLANNGISSSIQKLRCRANYRALKYSAPIEEFGNKLISRMRQNENPYLALHLRYEKDMLAFTGCSHNLTAEEDEELRQMRYKVGHWKEKEINGTERRLMGGCPLTPRETSLLLRALGFPSQTRIYLVAGEAYGRGSMKYLEDDFPNIFSHSSLSSEEELNPFKNHQNMLAGIDYIVALQSDIFLYSYDGNMAKAVQGHRRFENFKKTMNPDKVNFVKLVDKLDEGKFSWKKFSSKVKRLHEDRIGAPNPRERGEFPKLEESFYANPLPGCICGTRLESTQ 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1590 594 PANTHER OS02G0726500 PROTEIN-RELATED 68 590 - -
Ssu1g1590 594 PIRSF UCP009360 45 589 IPR024709 -
Ssu1g1590 594 MobiDBLite consensus disorder prediction 21 56 - -
Ssu1g1590 594 MobiDBLite consensus disorder prediction 1 74 - -
Ssu1g1590 594 PANTHER O-FUCOSYLTRANSFERASE 28 68 590 - -
Ssu1g1590 594 Pfam GDP-fucose protein O-fucosyltransferase 200 515 IPR019378 -
Ssu1g1590 594 CDD O-FucT_plant 200 521 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1590 Ssu-Chr1 37760498 37764665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1590 171 586 Miscellaneous Gene Families AT2G37980 66.827 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1590 - - gmx:100807090 1095.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1590 1 37760498 37764665 Ssu1g1590 1 37760498 37764665 ECH
Ssu6g0594 6 9264452 9269526 Ssu1g1590 1 37760498 37764665 PCT