Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0579 aTGGCGGAGGATTTCTCGAAAGCGGTTGACGACGGGCTGAAGCTCTCGAAGCGCATTTACTTCGGGAAGGACCGGGCGGTGGCGCCGCCGAAGCCGCCGCCGGCTATGGCGCGGTCGGCCACCTCGTTCCTTCCTTCGGCGCCGATGGCCTACGCGGTGATCTACGATCCAGGGATCGTGGACAACCCCGACATCCCGAGCTACCAGCCGCACGTGTACGGCAGGTGCGACCCTCCGGCGCTGATTCCGCTTCAGATGAACGCGATTGAGATGGAAGCTGATTGTTACCATGACACCGCGTTCGTCACCGTCTCCGGCACTTGGAGACTCCATTGCGTCATGGGAAGCCGCGCCTGCGATTGCCGCGTCGCTATTCCCATGGGCCACCAGGGTTCAATTCTAGGTGTTGAGGTTAGCGCTCCGAGAAAGTCATATTCGACTCAACTGGTTGTTATGGAGGATGATGACAATAGGGACGGGAATGGCGGGCCGGCCCAAAACGGAGGGTTTCTCAAGCccaatatatttactttaactATACCGCAGATTGATGGGGGTTCCAAATTGTCGATTAGAGTTCGTTGGTCTCAGAAAATAGTGTACTCCAATGGCCAGTTCTCTTTGAATGTGCCGTTTGCCTTTCCTGATTTCGTCAACCCTGCGGGGAAGAAAATATCTAAGAGAGAAAAGATACAAATAAATGTGGATGCTGTTACTGGAGGGGAGCTTCTGTGCAAGACAATAAGCCACCCACTGAAGGAAGTGAGGCGCCATGCGGGGAGTATGGGCTTCTTATATGATTCCGAAGTTCTCTCGTGGtctaaagttgattttagcttttCATATGCTGTTTCTTCAAGTCATATAAATGGTGGTGTTCTTTTGGAATCTGCATCTGGGCATGATTTTGATCAAAGAGAGATGTTCTACATGTATCTTTCTCCGGGAGATATTCGGAGTAAGAAGGTATTCAAAAAGGACATAATATTCATTATTGACATCAGCGGTAGCATGCGGGGAAAGCTAATTGAGGACACCAAGAATGCACTATTGGCTGCTCTCTCTAAGCTTAATCAAAATGATTCCTTTAATATTCTAGCCTTTAATGGAGAGACTTATCTATTTTCCAAATCGATGGAATTGGCTTCTGGGGATGCTGTTGAAAGGGCCATTGAGTGGATTAACACGAATTTTGTTGCTGGGGGGGGTACAAATATTTCACATCCATTAAACACGgCAATGGAGATGCTATGCAATGCTCAAAGTTCAGTTCCAATAATTTTCCTAGTTACAGATGGAACTGTTGAAGATGAGAGACAAATTTGTGCTATGGTAAAGAATCGTATGATCAATGGAGAGTCAATATGCCCTCGAATTTATACATTTGGCATTGGTTTGTTCTGCAATCATTATTTCTTGCGGATGCTTGCAATGATTGGTAGGGGCCAATATGATGCTGCATTGAATGTAGATTTGATTGAGCCTCGAATGCTGACATTGTTTGACAAAGCTTCATCTCTCATTCTTGCAAATATCAAAATGGACACATTGGATGATCTTGATGAACTCGAGgTATACCATTCTCATATTCCAGATCTTTCATCAGAGGGTCCATTGATTTTATCTGGAAGATACAGGGGAAATTTTCCCAAAACTCTTAAAGTCGAAGGTATCTTGGCTGATTTCAGTAATTTTGTAGTAGATATGAAGATACAAAATGCCAAGGACATATCTGTAGAAAGGGTTTCTGCACGAGATCAAATAGAGCATCTAACTGCTCAAGCATGGCTTTTGGAAAATAAACAACTAGAACAGAAGGTTACAAATCTGAGCCTGCAGACTGGCTTTATGTCTGAGTATACACGAATGATAATACTTGAGACTGATCATCTAAAGAAAGTTCAGGAATCAACTGGAACGAAAGAAGCGTCAAAAAAGAGTCATCCTCAGTATGAGGCACCCGTCCAAGGCCAGAGAATGATTTTACTACCACATTTGGGTATTGGCTTCGGCAACTTAACTGAAACTGCTGAAAATACTCCTCCAGGATCTGAAACGAAATTGCCTGAAGTGGCTGAAATCTTTAAGGCAGCCTCAAATTGTTGTGAAACCTTTTGCAGTTACTGCTGTTGCATGTGCTGCATCCAGTGCTGTACCCGGATAAACAACCAATGTGCAACTGCATTGACACAACTCTGCATTGGTCTAGGATGCTTTGGCTGCCTCACATGTTGTTCAGAAATATGTTGTTCTGGAAACGAAGGCTGA 2268 0.4436 MAEDFSKAVDDGLKLSKRIYFGKDRAVAPPKPPPAMARSATSFLPSAPMAYAVIYDPGIVDNPDIPSYQPHVYGRCDPPALIPLQMNAIEMEADCYHDTAFVTVSGTWRLHCVMGSRACDCRVAIPMGHQGSILGVEVSAPRKSYSTQLVVMEDDDNRDGNGGPAQNGGFLKPNIFTLTIPQIDGGSKLSIRVRWSQKIVYSNGQFSLNVPFAFPDFVNPAGKKISKREKIQINVDAVTGGELLCKTISHPLKEVRRHAGSMGFLYDSEVLSWSKVDFSFSYAVSSSHINGGVLLESASGHDFDQREMFYMYLSPGDIRSKKVFKKDIIFIIDISGSMRGKLIEDTKNALLAALSKLNQNDSFNILAFNGETYLFSKSMELASGDAVERAIEWINTNFVAGGGTNISHPLNTAMEMLCNAQSSVPIIFLVTDGTVEDERQICAMVKNRMINGESICPRIYTFGIGLFCNHYFLRMLAMIGRGQYDAALNVDLIEPRMLTLFDKASSLILANIKMDTLDDLDELEVYHSHIPDLSSEGPLILSGRYRGNFPKTLKVEGILADFSNFVVDMKIQNAKDISVERVSARDQIEHLTAQAWLLENKQLEQKVTNLSLQTGFMSEYTRMIILETDHLKKVQESTGTKEASKKSHPQYEAPVQGQRMILLPHLGIGFGNLTETAENTPPGSETKLPEVAEIFKAASNCCETFCSYCCCMCCIQCCTRINNQCATALTQLCIGLGCFGCLTCCSEICCSGNEG 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0579 755 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 754 - -
Ssu6g0579 755 Pfam von Willebrand factor type A domain 326 484 IPR002035 -
Ssu6g0579 755 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 754 - -
Ssu6g0579 755 Gene3D von Willebrand factor, type A domain 326 502 IPR036465 -
Ssu6g0579 755 ProSiteProfiles VWFA domain profile. 327 520 IPR002035 -
Ssu6g0579 755 SUPERFAMILY vWA-like 326 489 IPR036465 -
Ssu6g0579 755 SMART VWA_4 325 494 IPR002035 -
Ssu6g0579 755 Coils Coil 593 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0579 Ssu-Chr6 8995280 9000375 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0579 - - gmx:100777542 1342.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0579 6 8995280 9000375 Ssu6g0579 6 8995280 9000375 ECH
Ssu6g0579 6 8995280 9000375 Ssu1g1612 1 38229451 38238036 PCT