Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1612 ATGGCCGAGGAACTCTCGAAAGCGGTGGAGGAGGGGCTGCGACTCTCGAAGCGCATATACTTCGGCAATGACAGGGCCGTGTCGCCGCCGAAGCCCCCTCCCAGCATGTCCAAGTCCCACACCGCGTACCTCCCAACCGCGCCCATGCTCTACGCCGTTATTAAAGACCCTTCCATCGTCGACAACCCTGACGTGCCCAGCTACCAGCCCTACGTGTACGGAAAGTGCGACCCCCCCGCGCTAATTCCCCTCCACATGACCGGTGTTCAGGTCGAAGCACATTGCTACCTAAATGCCGCGGCATTCGTCACCGTCTCTGCCTCGTGGAGACTCCACTGCGTCTCCGGCAGCCGCACCTGCGATTGCCTCGTCGCCGTGCCCGTGCCGCCTCAGGGTTCAATTCTAGGTGTGGAGGTCAGTGTTCATAGGAAATCTTATTCTACTCAGCTGGTTGATATGAAAGACAGCAATGGTAAGGCGAATATGATCCGAGCTCAAGATGGAGGCTTTCTCGGGCACAATTTGTTTACTTTGAATGTACCGCAGATCGATGGAGGTTCCAATTTATCTGTTAAATTTAGTTGGTACCAGAAGACACTATACAGCAATGATGTGTTCTGCTTGAATGTGCCATTTACCTTTCCTGATTTTGTCAACCCTGTTGGGAAGAAAatgccaaaaaaagaaaagatagaaataaatgtGAATGCTATAACTGGAAGTGAGCTTCTATGCAAGACAATGAGTCATCCCCTGAAGAAAGTGAGGCATAATGCTGGGAGTATGGGTTTCTTGTATGAGTCAGATGTTCTCTCGTGGTCAAAAACTGATTTCAGCTTTTCATATGCTGTGCCTGATTCTTCAAGTCGTATAAGTGGTAGTGTTCTTTTGGAATCTGCATCTGTGGATGATTTTGATCAAAGAGGGATGTTCTGCATGTACCTTTCTCCTGGAAATCTTCAGAGTAGGAAGATATTCAGAAAGGACGTCGTATTTGTGATTGACATAAGTGGAAGCACGCGGGGAAAGCTAATCGACGACACAAAGAATGCACTATCGGCTGCTCTCTCTAAGCTCAATCCTGATGATTCATTTAGTATTATAGCATTTAATGGAGAGatatatcaattttcaaaatcaatggAATTGGCTTCAAAGGATGCCGTTGAAAGGGCCATTGAGtggattaacattaattttgttgCAGGGGGTGATACAAATATTTTGCATCCCTTAAACACGGCAAGAGAGATGCTATCTGATGCTCGAAGTTCAGTTCCAATTATTTTCCTAGTTACAGATGGAACTGTGGAAGATGAGAGACAAATTTGTGATATGATAAAGAATCATATGACCAATGGAGAGTCAATAGCCCCCCGAATTTACACTTTTGGTATAGGTTCATTCTGCAATCATTATTTCTTGCGGATGCTTGCTATGACTGGTCGGGGCCAACATGTTGCAGCATTGGATGTAGGCAAAGCCATTATGACCTATTTGAATTATCTATTGCCAGATTCGGTCGAGCCTCAGATGCTGAAATTGTTTGACAAAGCTTCATCTCTTGTTCTTGCGAATATCACAATGGACATATTCAATGATCTGGATGAAGTTGAGGTGTGCCCCTCCCATATTCCAGATCTTTCAACAGATGGTCCATTGATTTTATCTGGAAGATACAAGGGAAGTTTTCCCAAAGATCTTGAAATTAAAGGTGTCTTGGCTGATTTCAGTAATTTTGTAATAGATATGAAGATTCAAGAGGCCAAGGACATACCTGTACAAAAGATTTGTGCAAGAGATCAAATAGAGTATCTTACTGCTCAAGCATGGCTCtcaaaagatgaaaaattagAACAGAAGGTTGCAAAGCTTAGCTTACAGACTGGCTTCGTATCCGAGTACACGTGTATGGCAATTCTTGAGAATGATCATCGAAAGAAAGTCAAGGAATCAAATGGAAAGAAAGAAGTGTCAAAAAAGAGCCATCCTCAGAGTGGAGGAAATGTTCAAGGCCAGAGAATTATTTTGCTCCCTCACCTAGGTATAGGATTTGGCAACTTGACTGCAACTGTTGAAAACATTCCACCGGGATCTGAAGAAACAAAAGTGGCTGATGGGGCTGAAATCTTTGTTAAGGCGGCCACAAATTGTTGTGGCACCTTCTGCAATTACTGCTGTTGCATGTGCTGCATCCAGGCCTGTACCCGGATAAACAACCAATGTGCAATTGCATTGACTCAGCTTTGCGTTGGCTTAGGATGCTTCAGCTGCCTCAACTGTTGTTCAGAAATATGCTATTCTGGAAATGAAAGCTGA 2319 0.4325 MAEELSKAVEEGLRLSKRIYFGNDRAVSPPKPPPSMSKSHTAYLPTAPMLYAVIKDPSIVDNPDVPSYQPYVYGKCDPPALIPLHMTGVQVEAHCYLNAAAFVTVSASWRLHCVSGSRTCDCLVAVPVPPQGSILGVEVSVHRKSYSTQLVDMKDSNGKANMIRAQDGGFLGHNLFTLNVPQIDGGSNLSVKFSWYQKTLYSNDVFCLNVPFTFPDFVNPVGKKMPKKEKIEINVNAITGSELLCKTMSHPLKKVRHNAGSMGFLYESDVLSWSKTDFSFSYAVPDSSSRISGSVLLESASVDDFDQRGMFCMYLSPGNLQSRKIFRKDVVFVIDISGSTRGKLIDDTKNALSAALSKLNPDDSFSIIAFNGEIYQFSKSMELASKDAVERAIEWININFVAGGDTNILHPLNTAREMLSDARSSVPIIFLVTDGTVEDERQICDMIKNHMTNGESIAPRIYTFGIGSFCNHYFLRMLAMTGRGQHVAALDVGKAIMTYLNYLLPDSVEPQMLKLFDKASSLVLANITMDIFNDLDEVEVCPSHIPDLSTDGPLILSGRYKGSFPKDLEIKGVLADFSNFVIDMKIQEAKDIPVQKICARDQIEYLTAQAWLSKDEKLEQKVAKLSLQTGFVSEYTCMAILENDHRKKVKESNGKKEVSKKSHPQSGGNVQGQRIILLPHLGIGFGNLTATVENIPPGSEETKVADGAEIFVKAATNCCGTFCNYCCCMCCIQACTRINNQCAIALTQLCVGLGCFSCLNCCSEICYSGNES 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1612 772 ProSiteProfiles VWFA domain profile. 329 503 IPR002035 -
Ssu1g1612 772 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 771 - -
Ssu1g1612 772 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 771 - -
Ssu1g1612 772 MobiDBLite consensus disorder prediction 647 662 - -
Ssu1g1612 772 Pfam von Willebrand factor type A domain 328 485 IPR002035 -
Ssu1g1612 772 Gene3D von Willebrand factor, type A domain 327 500 IPR036465 -
Ssu1g1612 772 SMART VWA_4 327 504 IPR002035 -
Ssu1g1612 772 MobiDBLite consensus disorder prediction 647 670 - -
Ssu1g1612 772 SUPERFAMILY vWA-like 328 490 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1612 Ssu-Chr1 38229451 38238036 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1612 - - gmx:100820133 1314.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0579 6 8995280 9000375 Ssu1g1612 1 38229451 38238036 PCT