Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0568 ATGTTGGGGAAGAGGCCCCGGCCAATGATCGGAAAGTTGTCGGAATTGTTGGTCTCGAGAGGCCGCGCGGTGGCACTTTTGGACACCACCGGAAGCCCAAGAGGCCCACTAGACATGAAGATGCAATCACCAAGAGGATTAAAGAACTATGACCTCGGTGGCGTTGGTCTAGGAATTGTGGTGGCTCTTGATAAATCCAGCGAGGGTGGACGTGAAGTTTTGCCCAAACACGCCGTTTGTACCTCCAATTTGAACCGATCCGGCCCAATCCCGGTTCAGTGTTCCAAAAGCCCAGATGAAATTGATGTGGAGGAATACACCTATGTGACACGTCACGTCCCTAACAAAACATTCACTAAGGTATGCTATGATGGCGGTGAAGGCGATGTTTGGAGACTTGGGTATTATAACAACAACGTTGGTGTTCTCAGAAGCACCACACCACAACCTTTAATTGAGGCCGAATCATCATATCCCACATCGAATTTTCTCAGTTCATGTCACTTGTGCGGAAAGAAACTCCACGGCAAAGACATATACATGTACAGAGGAGAGAAAGCGTTTTGTAGCCCAGAGTGTCGTTCGAGTCAAATAATGATGGACGAACGCAAAGAGCGGTGTAGGTCAGAAGCTTCGAGGTCTGTGGAATTGTCGAGCTCGCCTTATACGACGGAACAAATATTTTCAACTGGGATTCTTGCGCTTTAG 708 0.4816 MLGKRPRPMIGKLSELLVSRGRAVALLDTTGSPRGPLDMKMQSPRGLKNYDLGGVGLGIVVALDKSSEGGREVLPKHAVCTSNLNRSGPIPVQCSKSPDEIDVEEYTYVTRHVPNKTFTKVCYDGGEGDVWRLGYYNNNVGVLRSTTPQPLIEAESSYPTSNFLSSCHLCGKKLHGKDIYMYRGEKAFCSPECRSSQIMMDERKERCRSEASRSVELSSSPYTTEQIFSTGILAL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0568 235 Pfam zinc-finger of the FCS-type, C2-C2 155 204 IPR007650 -
Ssu6g0568 235 ProSiteProfiles Zinc finger FLZ-type profile. 162 205 IPR007650 -
Ssu6g0568 235 PANTHER DUF581 FAMILY PROTEIN 1 235 - -
Ssu6g0568 235 PANTHER OS02G0174800 PROTEIN 1 235 IPR044604 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0568 Ssu-Chr6 8861178 8861997 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0568 - - gmx:100816402 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0568 6 8861178 8861997 Ssu6g0568 6 8861178 8861997 ECH
Ssu6g0568 6 8861178 8861997 Ssu1g1623 1 38574556 38576067 PCT